RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TTC28Q96AY4 2481 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 YPEL1O60688 119 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 GRPP07492 148 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 TPPP2P59282 170 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 UBE2G2P60604 165 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 ERVK11-1P61568 191 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 YPEL2Q96QA6 119 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 DERL1Q9BUN8 251 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 NPCDR1Q9BY65 106 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 ZDHHC11Q9H8X9 412 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 PATZ1Q9HBE1 687 aaKnown RBP13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 CLN8Q9UBY8 286 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 PGPEP1LA6NFU8 196 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 PDE6DO43924 150 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 PAFAH1B2P68402 229 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 TBC1D28Q2M2D7 210 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 NANOS1Q8WY41 292 aaKnown RBP13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 MBNL3Q9NUK0 354 aaKnown RBP13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 TMPRSS2O15393 492 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 RAMP3O60896 148 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 TNFSF10P50591 281 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 TPTE2P1Q5T6R2 138 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 TEX43Q6ZNM6 134 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 OR1L1Q8NH94 360 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 SFRP2Q96HF1 295 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 HSPB7Q9UBY9 170 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 POLDIP2Q9Y2S7 368 aa13.89□□□□□ -0.19
PCDHA1-201ENST00000378133 A8MXE2 369 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 SH2D1BO14796 132 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 KRASP01116 189 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 ATP5G3P48201 142 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 CDC34P49427 236 aaPredicted RBP13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 HOXA4Q00056 320 aaPredicted RBP13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 TMEM183BQ1AE95 376 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 PRR14LQ5THK1 2151 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 ITGB1BP1O14713 200 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 TMEM164Q5U3C3 297 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 Q8IYB0 196 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 ZNF114Q8NC26 417 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 WIPI2Q9Y4P8 454 aa13.88□□□□□ -0.19
PCDHA1-201ENST00000378133 KLRC4-KLRK1H3BQV0 150 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 PSPNO60542 156 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 SMPD2O60906 423 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 YPEL3P61236 119 aaPredicted RBP13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 RANP62826 216 aaKnown RBP13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 ZNF146Q15072 292 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 VN1R17PQ8TDU5 208 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 HSPB9Q9BQS6 159 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 VAMP8Q9BV40 100 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 PMS2P5A8MQ11 134 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 C21orf140B9A014 251 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 RBFOX2O43251 390 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 KITLGP21583 273 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 G6PCP35575 357 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 ZNF816Q0VGE8 651 aaPredicted RBP13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 OR5I1Q13606 314 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 MSMO1Q15800 293 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 ZNF808Q8N4W9 903 aaPredicted RBP13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 NCOR1P1Q9H4R4 102 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 TP53TG3Q9ULZ0 132 aa13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 KLF13Q9Y2Y9 288 aaPredicted RBP13.87□□□□□ -0.19
PCDHA1-201ENST00000378133 LNP1A1A4G5 178 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 C17orf112F2Z3M2 114 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 CEACAM8P31997 349 aaPredicted RBP13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 CDKN1AP38936 164 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 CXorf67Q86X51 503 aaPredicted RBP13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 SLC25A40Q8TBP6 338 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 FAM122AQ96E09 287 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 GAL3ST2Q9H3Q3 398 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 F6UZH7 168 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 RPL30P62888 115 aaKnown RBP13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 RNFT1Q5M7Z0 435 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 PLA2G2CQ5R387 149 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 OR2D2Q9H210 308 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 DNAJC4Q9NNZ3 241 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 SPRR3Q9UBC9 169 aa13.86□□□□□ -0.19
PCDHA1-201ENST00000378133 LRRC30A6NM36 301 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 RNF212BA8MTL3 300 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 ZG16O60844 167 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 SERF1AO75920 110 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 HAND1O96004 215 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 CRISP2P16562 243 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 SELENOTP62341 195 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 MDS2Q8NDY4 140 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 OR52L2PQ8NGH6 319 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 KCNIP2Q9NS61 270 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 PSG7Q13046 419 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 ZNF826PQ6ZT77 177 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 OR5AU1Q8NGC0 362 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 GALMQ96C23 342 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 LOXL4Q96JB6 756 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 KCNIP1Q9NZI2 227 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 LOC400499M0QZD8 3231 aa13.85□□□□□ -0.19
PCDHA1-201ENST00000378133 TRAV38-1A0A0B4J264 116 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 TMEM238LA0A1B0GVL6 79 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 WNT9BO14905 357 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 IL6RP08887 468 aaPredicted RBP13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 CBLN1P23435 193 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms