RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SYNJ2BPP57105 145 aa16.09■□□□□ 0.17
VSX1-201ENST00000376707 TATDN3Q17R31 274 aa16.09■□□□□ 0.17
VSX1-201ENST00000376707 ZNF343Q6P1L6 599 aa16.09■□□□□ 0.17
VSX1-201ENST00000376707 SGPP2Q8IWX5 399 aa16.09■□□□□ 0.17
VSX1-201ENST00000376707 OSR1Q8TAX0 266 aaPredicted RBP16.09■□□□□ 0.17
VSX1-201ENST00000376707 SLC25A38Q96DW6 304 aa16.09■□□□□ 0.17
VSX1-201ENST00000376707 ANXA10Q9UJ72 324 aa16.09■□□□□ 0.17
VSX1-201ENST00000376707 A0A0A6YYH2 397 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 A6NJ64 397 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 TMEM127O75204 238 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 SLC22A5O76082 557 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 IGLV2-14P01704 120 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 OR9G9P0C7N8 305 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 IGHV4-30-4P0DP06 118 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 NFYAP23511 347 aaPredicted RBP16.08■□□□□ 0.16
VSX1-201ENST00000376707 DYRK1AQ13627 763 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 OR5H6Q8NGV6 325 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 SRSF12Q8WXF0 261 aaKnown RBP16.08■□□□□ 0.16
VSX1-201ENST00000376707 DCUN1D5Q9BTE7 237 aa16.08■□□□□ 0.16
VSX1-201ENST00000376707 H0Y980 276 aa16.07■□□□□ 0.16
VSX1-201ENST00000376707 CREBL2O60519 120 aaPredicted RBP16.07■□□□□ 0.16
VSX1-201ENST00000376707 ACTL6BO94805 426 aa16.07■□□□□ 0.16
VSX1-201ENST00000376707 RPEL1Q2QD12 228 aa16.07■□□□□ 0.16
VSX1-201ENST00000376707 IDNKQ5T6J7 187 aa16.07■□□□□ 0.16
VSX1-201ENST00000376707 Q8N1Y9 231 aa16.07■□□□□ 0.16
VSX1-201ENST00000376707 ADAD2Q8NCV1 583 aaKnown RBP16.07■□□□□ 0.16
VSX1-201ENST00000376707 RBMX2Q9Y388 322 aaKnown RBP16.07■□□□□ 0.16
VSX1-201ENST00000376707 PRELID3BQ9Y3B1 194 aa16.07■□□□□ 0.16
VSX1-201ENST00000376707 IGKV1D-13A0A0B4J2D9 117 aa16.06■□□□□ 0.16
VSX1-201ENST00000376707 TUSC2O75896 110 aa16.06■□□□□ 0.16
VSX1-201ENST00000376707 TRBV12-3P01733 135 aa16.06■□□□□ 0.16
VSX1-201ENST00000376707 SAA1P0DJI8 122 aaPredicted RBP16.06■□□□□ 0.16
VSX1-201ENST00000376707 IGKV1-13P0DP09 117 aa16.06■□□□□ 0.16
VSX1-201ENST00000376707 KCTD9Q7L273 389 aa16.06■□□□□ 0.16
VSX1-201ENST00000376707 HUWE1Q7Z6Z7 4374 aaKnown RBP16.05■□□□□ 0.16
VSX1-201ENST00000376707 FCGR3BO75015 233 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 CDK10Q15131 360 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 TIMM50Q3ZCQ8 353 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 CASC10Q5T4H9 136 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 IL34Q6ZMJ4 242 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 SNAPC3Q92966 411 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 SPIN2AQ99865 258 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 SPIN2BQ9BPZ2 258 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 ZNF430Q9H8G1 570 aaPredicted RBP16.05■□□□□ 0.16
VSX1-201ENST00000376707 ADAM30Q9UKF2 790 aa16.05■□□□□ 0.16
VSX1-201ENST00000376707 MRPS7Q9Y2R9 242 aaKnown RBP16.05■□□□□ 0.16
VSX1-201ENST00000376707 TNCP24821 2201 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 TRAV18A0A075B6X5 111 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 FAM223BA6NKX1 122 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 A8MZ25 164 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 RBMXL2O75526 392 aaKnown RBP16.04■□□□□ 0.16
VSX1-201ENST00000376707 RPL30P62888 115 aaKnown RBP16.04■□□□□ 0.16
VSX1-201ENST00000376707 RHOGP84095 191 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 EIF4EBP1Q13541 118 aaPredicted RBP16.04■□□□□ 0.16
VSX1-201ENST00000376707 OR2B11Q5JQS5 317 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 FAM223AQ8IWN6 122 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 MMD2Q8IY49 270 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 TM2D3Q9BRN9 247 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 AKIP1Q9NQ31 210 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 C19orf73Q9NVV2 129 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 SPATA2Q9UM82 520 aa16.04■□□□□ 0.16
VSX1-201ENST00000376707 OR2A4O95047 310 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 PRH1P02810 166 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 CSN3P07498 182 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 LYL1P12980 280 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 ATP5G2Q06055 141 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 EXOSC2Q13868 293 aaKnown RBP16.03■□□□□ 0.16
VSX1-201ENST00000376707 LCN12Q6JVE5 192 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 GTSCR1Q86UQ5 136 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 HOGA1Q86XE5 327 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 CROCCP3Q8IVE0 287 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 BEST4Q8NFU0 473 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 HSD17B10Q99714 261 aaKnown RBP16.03■□□□□ 0.16
VSX1-201ENST00000376707 AUNIPQ9H7T9 357 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 PALMDQ9NP74 551 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 DIABLOQ9NR28 239 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 SIGLEC8Q9NYZ4 499 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 PEMTQ9UBM1 199 aa16.03■□□□□ 0.16
VSX1-201ENST00000376707 MSMO1Q15800 293 aa16.02■□□□□ 0.16
VSX1-201ENST00000376707 C10orf55Q5SWW7 151 aa16.02■□□□□ 0.16
VSX1-201ENST00000376707 Q8N402 240 aa16.02■□□□□ 0.16
VSX1-201ENST00000376707 CITED4Q96RK1 184 aa16.02■□□□□ 0.16
VSX1-201ENST00000376707 TRBV9A0A0B4J1U6 114 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 ARPC4P59998 168 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 ZNF45Q02386 682 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 ZNF66Q6ZN08 573 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 SLC25A42Q86VD7 318 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 TTC9CQ8N5M4 171 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 GVQW1Q8N7I0 195 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 OR4S2Q8NH73 311 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 TCTEX1D2Q8WW35 142 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 YIPF6Q96EC8 236 aa16.01■□□□□ 0.15
VSX1-201ENST00000376707 A0A087WXM4 84 aa16■□□□□ 0.15
VSX1-201ENST00000376707 BRWD1-AS2P59051 145 aa16■□□□□ 0.15
VSX1-201ENST00000376707 VKORC1L1Q8N0U8 176 aa16■□□□□ 0.15
VSX1-201ENST00000376707 NECAP1Q8NC96 275 aa16■□□□□ 0.15
VSX1-201ENST00000376707 VSTM2AQ8TAG5 236 aa16■□□□□ 0.15
VSX1-201ENST00000376707 TUBA4BQ9H853 241 aa16■□□□□ 0.15
VSX1-201ENST00000376707 BMPR1BO00238 502 aa15.99■□□□□ 0.15
VSX1-201ENST00000376707 XRCC3O43542 346 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms