RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TMEM42Q69YG0 159 aa14.56□□□□□ -0.08
LDLRAP1-201ENST00000374338 CXorf67Q86X51 503 aaPredicted RBP14.56□□□□□ -0.08
LDLRAP1-201ENST00000374338 OR4F5Q8NH21 305 aa14.56□□□□□ -0.08
LDLRAP1-201ENST00000374338 GPR146Q96CH1 333 aa14.56□□□□□ -0.08
LDLRAP1-201ENST00000374338 OR4F4Q96R69 305 aa14.56□□□□□ -0.08
LDLRAP1-201ENST00000374338 FAM173AQ9BQD7 235 aa14.56□□□□□ -0.08
LDLRAP1-201ENST00000374338 IGKV1D-33P01593 117 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 IGKV1-33P01594 117 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 SLC25A22Q9H936 323 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 SLC39A9Q9NUM3 307 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 PCNX1Q96RV3 2341 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 PGPEP1LA6NFU8 196 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 F2Z2F3 143 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 PSMB3P49720 205 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 YPEL3P61236 119 aaPredicted RBP14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 PCBD1P61457 104 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 OR8B8Q15620 311 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 VAMP3Q15836 100 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 ALKBH6Q3KRA9 238 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 Q6ZRM9 215 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 PSMG3Q9BT73 122 aaPredicted RBP14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 ELOVL5Q9NYP7 299 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 OTOGLQ3ZCN5 2332 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 USF3Q68DE3 2245 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 WDR1O75083 606 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 CD59P13987 128 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 CRISP2P16562 243 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 NMSQ5H8A3 153 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 HES3Q5TGS1 186 aa14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 FAM103A1Q9BTL3 118 aaKnown RBP14.55□□□□□ -0.08
LDLRAP1-201ENST00000374338 VENTXO95231 258 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 DTYMKP23919 212 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 TSPOP30536 169 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 FOXL1Q12952 345 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 LHFPL4Q7Z7J7 247 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 C1QTNF5Q9BXJ0 243 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 FZR1Q9UM11 496 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 SP9P0CG40 484 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 CEBPDP49716 269 aaPredicted RBP14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 SERF2P84101 59 aa14.54□□□□□ -0.08
LDLRAP1-201ENST00000374338 C1QTNF9BB2RNN3 333 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 TMEM164Q5U3C3 297 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 BAGE3Q86Y29 109 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 BAGE2Q86Y30 109 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 ZDHHC23Q8IYP9 409 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 RPP25LQ8N5L8 163 aaKnown RBP14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 MT-CO3P00414 261 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 CYC1P08574 325 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 ERASQ7Z444 233 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 SIGLECL1Q8N7X8 197 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 SGMS2Q8NHU3 365 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 SLC35D1Q9NTN3 355 aa14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 MRPS16Q9Y3D3 137 aaKnown RBP14.53□□□□□ -0.08
LDLRAP1-201ENST00000374338 LOC102724200A0A096LPH7 203 aaPredicted RBP14.52□□□□□ -0.08
LDLRAP1-201ENST00000374338 IGKV1-6A0A0C4DH72 117 aa14.52□□□□□ -0.08
LDLRAP1-201ENST00000374338 LYZL6O75951 148 aa14.52□□□□□ -0.08
LDLRAP1-201ENST00000374338 HAPLN4Q86UW8 402 aa14.52□□□□□ -0.08
LDLRAP1-201ENST00000374338 HEATR1Q9H583 2144 aaKnown RBP14.52□□□□□ -0.08
LDLRAP1-201ENST00000374338 MLNRO43193 412 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 RHOGP84095 191 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 C10orf35Q96D05 121 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 SPRY4Q9C004 299 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 ZNF586Q9NXT0 402 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 CLN8Q9UBY8 286 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 POLEQ07864 2286 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 UBE2L5PA0A1B0GUS4 154 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 CD300LBA8K4G0 201 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 PSG1P11464 419 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 ZNF16P17020 682 aaPredicted RBP14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 VDAC1P21796 283 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 CBLN1P23435 193 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 Q6ZSR3 168 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 ZNF525Q8N782 197 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 B4GALT7Q9UBV7 327 aa14.52□□□□□ -0.09
LDLRAP1-201ENST00000374338 SIRPB1O00241 398 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 GPX1P07203 203 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 NPPCP23582 126 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 HOXC12P31275 282 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 PINX1Q96BK5 328 aaKnown RBP14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 IL19Q9UHD0 177 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 TRAPPC2LH3BP13 241 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 DNPH1O43598 174 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 CRYAAP02489 173 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 NBEAP1P0C6P0 100 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 KRTAP27-1Q3LI81 207 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 MDP1Q86V88 176 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 OR10V1Q8NGI7 309 aa14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 BCL2L2Q92843 193 aaPredicted RBP14.51□□□□□ -0.09
LDLRAP1-201ENST00000374338 SLC22A20A6NK97 555 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 RPS20P60866 119 aaKnown RBP14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 LRRC75BQ2VPJ9 315 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 SPANXN5Q5MJ07 72 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 OR1A1Q9P1Q5 309 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 SPRR3Q9UBC9 169 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 OR5B21A6NL26 309 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 NKX2-8O15522 239 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 AGFG2O95081 481 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 SP1P08047 785 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 CD99P14209 185 aa14.5□□□□□ -0.09
LDLRAP1-201ENST00000374338 CCL11P51671 97 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 266.8 ms