RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZNF44P15621 663 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 CA6P23280 308 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 NPBWR2P48146 333 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 SULT1A1P50225 295 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 CD81P60033 236 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 BTNL3Q6UXE8 466 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 SLC35E3Q7Z769 313 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 FAM58AQ8N1B3 248 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 OR56B2PQ8NGI1 322 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 OR13D1Q8NGV5 346 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 FAM213BQ8TBF2 198 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 OR5P3Q8WZ94 311 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 TVP23CQ96ET8 276 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 TP53RKQ96S44 253 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 C12orf57Q99622 126 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 CABLES2Q9BTV7 478 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 RTL8AQ9BWD3 113 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 LIN7CQ9NUP9 197 aaKnown RBP8.57□□□□□ -1.04
COL5A1-202ENST00000371820 TMEM242Q9NWH2 141 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 COA4Q9NYJ1 87 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 RNF7Q9UBF6 113 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 METTL1Q9UBP6 276 aaKnown RBP8.57□□□□□ -1.04
COL5A1-202ENST00000371820 FAM24AA6NFZ4 105 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 C5orf52A6NGY3 159 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 A6NLC8 198 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 TMEM210A6NLX4 147 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 J3QT63 122 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 UBE2CO00762 179 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 SH2D1BO14796 132 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 PTBP3O95758 552 aaKnown RBP8.56□□□□□ -1.04
COL5A1-202ENST00000371820 MBP02144 154 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 SNRNP70P08621 437 aaKnown RBP8.56□□□□□ -1.04
COL5A1-202ENST00000371820 RAB5AP20339 215 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 BCL3P20749 454 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 ATP6V0CP27449 155 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 PRSS12P56730 875 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 HLA-DRB3P79483 266 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 ZNF154Q13106 437 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 AWAT1Q58HT5 328 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 ZNF506Q5JVG8 444 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 SLC25A24Q6NUK1 477 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 RBMS3Q6XE24 437 aaKnown RBP8.56□□□□□ -1.04
COL5A1-202ENST00000371820 CALHM1Q8IU99 346 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 GAPTQ8N292 157 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 HSD17B11Q8NBQ5 300 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 OR10V1Q8NGI7 309 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 CD300LFQ8TDQ1 290 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 HIST1H2BAQ96A08 127 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 NIPSNAP3BQ9BS92 247 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 SCRT1Q9BWW7 348 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 WFDC1Q9HC57 220 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 UFSP2Q9NUQ7 469 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 KCNIP1Q9NZI2 227 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 INSIG2Q9Y5U4 225 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 TENM1Q9UKZ4 2725 aa8.56□□□□□ -1.04
COL5A1-202ENST00000371820 TRAV38-1A0A0B4J264 116 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 ADAM20O43506 726 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 CHST1O43916 411 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 VENTXO95231 258 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 OR2C1O95371 312 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 PPIAL4GP0DN37 164 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 NFYBP25208 207 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 RPL35P42766 123 aaKnown RBP8.55□□□□□ -1.04
COL5A1-202ENST00000371820 GPM6AP51674 278 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 IGSF11Q5DX21 431 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 PRAMEF6Q5VXH4 476 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 TRAT1Q6PIZ9 186 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 C12orf54Q6X4T0 127 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 TMEM182Q6ZP80 229 aaPredicted RBP8.55□□□□□ -1.04
COL5A1-202ENST00000371820 OR5C1Q8NGR4 320 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 RNASE11Q8TAA1 199 aaKnown RBP8.55□□□□□ -1.04
COL5A1-202ENST00000371820 HPSE2Q8WWQ2 592 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 MBD3L1Q8WWY6 194 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 BTF3L4Q96K17 158 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 CTDSP1Q9GZU7 261 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 CLN8Q9UBY8 286 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 TIMM9Q9Y5J7 89 aa8.55□□□□□ -1.04
COL5A1-202ENST00000371820 IGHV3-64DA0A0J9YX35 117 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.54□□□□□ -1.04
COL5A1-202ENST00000371820 AP4M1O00189 453 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 ZNF205O95201 554 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 AVPP01185 164 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 GRPP07492 148 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 SCTP09683 121 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 ANOS1P23352 680 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 S100PP25815 95 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 ZFP36P26651 326 aaKnown RBP8.54□□□□□ -1.04
COL5A1-202ENST00000371820 DYNLT3P51808 116 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 HILS1P60008 231 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 UBE2KP61086 200 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 POLR2GP62487 172 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL5A1-202ENST00000371820 ZNF818PQ6ZRF7 136 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 C1orf229Q6ZS94 237 aaPredicted RBP8.54□□□□□ -1.04
COL5A1-202ENST00000371820 DEFB108BQ8NET1 73 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 MRPL30Q8TCC3 161 aaKnown RBP8.54□□□□□ -1.04
COL5A1-202ENST00000371820 CLCC1Q96S66 551 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 OR51I2Q9H344 312 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms