RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 HCFC1P51610 2035 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 ZNF729A6NN14 1252 aaPredicted RBP16.4■□□□□ 0.22
LHX3-202ENST00000371748 SHISA9B4DS77 424 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 HSPB1P04792 205 aaKnown RBP16.4■□□□□ 0.22
LHX3-202ENST00000371748 CD55P08174 381 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 TNFRSF9Q07011 255 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 ARL16Q0P5N6 197 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 ZNF506Q5JVG8 444 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 SPANXN5Q5MJ07 72 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 CDPF1Q6NVV7 123 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 TCTEX1D1Q8N7M0 179 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 SAP30LQ9HAJ7 183 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 URGCP-MRPS24S4R325 110 aa16.4■□□□□ 0.22
LHX3-202ENST00000371748 TRGV10A0A0A0MS01 117 aa16.39■□□□□ 0.21
LHX3-202ENST00000371748 KBTBD11-OT1A0A1B0GTJ5 212 aa16.39■□□□□ 0.21
LHX3-202ENST00000371748 M0R1X1 148 aa16.39■□□□□ 0.21
LHX3-202ENST00000371748 GATCO43716 136 aaKnown RBP16.39■□□□□ 0.21
LHX3-202ENST00000371748 CASP6P55212 293 aa16.39■□□□□ 0.21
LHX3-202ENST00000371748 DMRTC2Q8IXT2 367 aaPredicted RBP16.39■□□□□ 0.21
LHX3-202ENST00000371748 NGBQ9NPG2 151 aa16.39■□□□□ 0.21
LHX3-202ENST00000371748 CLN8Q9UBY8 286 aa16.39■□□□□ 0.21
LHX3-202ENST00000371748 LRRC30A6NM36 301 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 FAM90A27PA6NNH2 459 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 FAM90A26D6RGX4 464 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 E7EQL1 145 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 TMPRSS2O15393 492 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 FCGR3BO75015 233 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 KLRB1Q12918 225 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 ZNF674Q2M3X9 581 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 H2BFWTQ7Z2G1 175 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HAPLN4Q86UW8 402 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 CLDND2Q8NHS1 167 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIPK2Q9H2X6 1198 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 NCOR1P1Q9H4R4 102 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HSPB7Q9UBY9 170 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 MARCH11A6NNE9 402 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BKO60814 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BJP06899 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BOP23527 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BBP33778 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 CA7P43166 264 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BDP58876 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BCP62807 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST2H2BEQ16778 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.38■□□□□ 0.21
LHX3-202ENST00000371748 C1orf229Q6ZS94 237 aaPredicted RBP16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BHQ93079 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 GNPNAT1Q96EK6 184 aaPredicted RBP16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BNQ99877 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 HIST1H2BMQ99879 126 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.38■□□□□ 0.21
LHX3-202ENST00000371748 GFOD1Q9NXC2 390 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 GAR1Q9NY12 217 aaKnown RBP16.38■□□□□ 0.21
LHX3-202ENST00000371748 ATRXP46100 2492 aa16.38■□□□□ 0.21
LHX3-202ENST00000371748 TGIF2-C20orf24A0A0A6YYL0 155 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 CXorf65A6NEN9 183 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 DFFBO76075 338 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 SPNS3Q6ZMD2 512 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 TVP23CQ96ET8 276 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 RAB29O14966 203 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 C9orf152Q5JTZ5 239 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 SLC25A24Q6NUK1 477 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 LINC01560Q8TB33 94 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 R3HDM4Q96D70 268 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 NIPSNAP3BQ9BS92 247 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 LAMP3Q9UQV4 416 aa16.37■□□□□ 0.21
LHX3-202ENST00000371748 VSTM5A8MXK1 200 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 CCL21O00585 134 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 RBMXL2O75526 392 aaKnown RBP16.36■□□□□ 0.21
LHX3-202ENST00000371748 NDUFB7P17568 137 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 TAS2R30P59541 319 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 CT45A1Q5HYN5 189 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 CT45A3Q8NHU0 189 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 CCL17Q92583 94 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 RNASE6Q93091 150 aaKnown RBP16.36■□□□□ 0.21
LHX3-202ENST00000371748 SIRT7Q9NRC8 400 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 IFNA5P01569 189 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 GRNP28799 593 aaKnown RBP16.36■□□□□ 0.21
LHX3-202ENST00000371748 S100A2P29034 98 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 SPINK9Q5DT21 86 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 AKR1C8PQ5T2L2 129 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 SLC35E3Q7Z769 313 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 THNSL2Q86YJ6 484 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 ZDHHC16Q969W1 377 aa16.36■□□□□ 0.21
LHX3-202ENST00000371748 RBMXL1Q96E39 390 aaKnown RBP16.36■□□□□ 0.21
LHX3-202ENST00000371748 MMP23AO75900 390 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 SSX9Q7RTT3 188 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 DYNLRB1Q9NP97 96 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 ARFGEF3Q5TH69 2177 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.35■□□□□ 0.21
LHX3-202ENST00000371748 NKX6-3A6NJ46 265 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 ZG16O60844 167 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 NDUFS6O75380 124 aaKnown RBP16.35■□□□□ 0.21
LHX3-202ENST00000371748 TLE4Q04727 773 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 ZNF600Q6ZNG1 722 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 LILRB2Q8N423 598 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 ZNF525Q8N782 197 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 RAB9BQ9NP90 201 aa16.35■□□□□ 0.21
LHX3-202ENST00000371748 TRAV38-1A0A0B4J264 116 aa16.34■□□□□ 0.21
LHX3-202ENST00000371748 TMEM178BH3BS89 294 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms