RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 VPREB3Q9UKI3 123 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 SVEP1Q4LDE5 3571 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 OR2F2O95006 317 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 IGKV1-39P01597 117 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 IGKV1D-39P04432 117 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 NQO2P16083 231 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 HNF4GQ14541 408 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 ANKRD55Q3KP44 614 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 C16orf82Q7Z2V1 217 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 LGI3Q8N145 548 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 LRTM2Q8N967 370 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 NPBQ8NG41 125 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 OR52B4Q8NGK2 314 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 CASTOR1Q8WTX7 329 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 MITD1Q8WV92 249 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 RITA1Q96K30 269 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 RBM14Q96PK6 669 aaKnown RBP14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 SEC22CQ9BRL7 303 aa14.29□□□□□ -0.12
SDCBP2-201ENST00000339987 A0A0B4J2A0 478 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 SRRM4A7MD48 611 aaKnown RBP14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 SNRPGP15A8MWD9 76 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 CLDN34H7C241 214 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 ATG12O94817 140 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 NDUFA3O95167 84 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 IGLV2-23P01705 113 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 LY6EQ16553 131 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 SELENOHQ8IZQ5 122 aaKnown RBP14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 CADM3Q8N126 398 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 COQ8AQ8NI60 647 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 LHFPL5Q8TAF8 219 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 RBPMSQ93062 196 aaKnown RBP14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 R3HDM4Q96D70 268 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 PLSCR3Q9NRY6 295 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 C1RLQ9NZP8 487 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 SHPKQ9UHJ6 478 aa14.28□□□□□ -0.12
SDCBP2-201ENST00000339987 A0A0A6YYJ9 748 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 A0A0B4J293 547 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 DUXBA0A1W2PPF3 345 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 C7orf66A4D0T2 115 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 DNAJC9-AS1A6NH13 148 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 NBR2O15453 112 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 HILS1P60008 231 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 UBE2KP61086 200 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 MMDQ15546 238 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 TATDN3Q17R31 274 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 TMEM268Q5VZI3 342 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 TMEM219Q86XT9 240 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 ZNF695Q8IW36 515 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 RHOVQ96L33 236 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 JMJD8Q96S16 334 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 PHB2Q99623 299 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 SLC25A33Q9BSK2 321 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 PRR13Q9NZ81 148 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 MOB4Q9Y3A3 225 aa14.27□□□□□ -0.12
SDCBP2-201ENST00000339987 SETD2Q9BYW2 2564 aaPredicted RBP14.27□□□□□ -0.13
SDCBP2-201ENST00000339987 MXRA5Q9NR99 2828 aa14.27□□□□□ -0.13
SDCBP2-201ENST00000339987 MARCH11A6NNE9 402 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 RRHO14718 337 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 CREBL2O60519 120 aaPredicted RBP14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 CNTFRP26992 372 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 F2RL1P55085 397 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 ERVK-16P61578 105 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 PSG5Q15238 335 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 VMA21Q3ZAQ7 101 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 TEX45Q8NA69 505 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 PPP1R14BQ96C90 147 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 SEC22AQ96IW7 307 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 RAB18Q9NP72 206 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 KIAA1456Q9P272 454 aa14.26□□□□□ -0.13
SDCBP2-201ENST00000339987 M0QZK8 103 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 FGF16O43320 207 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 KRASP01116 189 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 CRYGBP07316 175 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 SAA1P0DJI8 122 aaPredicted RBP14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 PUSL1Q8N0Z8 303 aaKnown RBP14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 C12orf45Q8N5I9 185 aaPredicted RBP14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 VSTM2AQ8TAG5 236 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 CHIAQ9BZP6 476 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 ESM1Q9NQ30 184 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 BET1LQ9NYM9 111 aa14.25□□□□□ -0.13
SDCBP2-201ENST00000339987 SLC25A17O43808 307 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 CHST1O43916 411 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 IGKV1-5P01602 117 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 IL6RP08887 468 aaPredicted RBP14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 P0C879 139 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 G6PCP35575 357 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 AKR1C2P52895 323 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 C5orf64Q2M2E5 130 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 FAM219AQ8IW50 185 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 VKORC1L1Q8N0U8 176 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 FAM71E2Q8N5Q1 922 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 SLC35G3Q8N808 338 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 Q8N9W7 124 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 DMBX1Q8NFW5 382 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 OR4A5Q8NH83 315 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 LSM10Q969L4 123 aaKnown RBP14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 TNFRSF19Q9NS68 423 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 ALG5Q9Y673 324 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 DBX1A6NMT0 343 aa14.24□□□□□ -0.13
SDCBP2-201ENST00000339987 NCBP2LA6PVI3 153 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms