RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 QTRT1Q9BXR0 403 aaKnown RBP14.99□□□□□ -0.01
USP39-201ENST00000323701 KLF2Q9Y5W3 355 aaPredicted RBP14.99□□□□□ -0.01
USP39-201ENST00000323701 TNCP24821 2201 aa14.99□□□□□ -0.01
USP39-201ENST00000323701 TET2Q6N021 2002 aaPredicted RBP14.99□□□□□ -0.01
USP39-201ENST00000323701 WNK2Q9Y3S1 2297 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 SRRM4A7MD48 611 aaKnown RBP14.98□□□□□ -0.01
USP39-201ENST00000323701 GNB2P62879 340 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 TMEM267Q0VDI3 215 aaPredicted RBP14.98□□□□□ -0.01
USP39-201ENST00000323701 CLINT1Q14677 625 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 Q8N7P7 452 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.98□□□□□ -0.01
USP39-201ENST00000323701 A1L4Q6 167 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 TAAR5O14804 337 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 GPR37O15354 613 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 ZFP36P26651 326 aaKnown RBP14.98□□□□□ -0.01
USP39-201ENST00000323701 LINC00311Q8N616 119 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 OR4S2Q8NH73 311 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 OR9G1Q8NH87 305 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 RFNGQ9Y644 331 aa14.98□□□□□ -0.01
USP39-201ENST00000323701 IGHV2-26A0A0B4J1V2 119 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 TXNL1O43396 289 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 MMP9P14780 707 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 TLE4Q04727 773 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 NRGNQ92686 78 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 PHYHIPLQ96FC7 376 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 RHOVQ96L33 236 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 RAB40CQ96S21 281 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 SPOCK3Q9BQ16 436 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 SSBP3Q9BWW4 388 aaPredicted RBP14.97□□□□□ -0.01
USP39-201ENST00000323701 TMEM140Q9NV12 185 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 ONECUT1Q9UBC0 465 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 NQO2P16083 231 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 DYNLT3P51808 116 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 ARL16Q0P5N6 197 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 HAPLN4Q86UW8 402 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 C8orf31Q8N9H6 132 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 OR5C1Q8NGR4 320 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 BPESC1Q9GZL8 116 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 WSB1Q9Y6I7 421 aa14.97□□□□□ -0.01
USP39-201ENST00000323701 NBPF19A0A087WUL8 3843 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 FBXO24O75426 580 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 RBMXL2O75526 392 aaKnown RBP14.96□□□□□ -0.01
USP39-201ENST00000323701 ATG12O94817 140 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 IGLV1-47P01700 117 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 KIR2DS2P43631 304 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 ARF6P62330 175 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 RELBQ01201 579 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 SLC35D1Q9NTN3 355 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 PSENENQ9NZ42 101 aa14.96□□□□□ -0.01
USP39-201ENST00000323701 FAM90A26D6RGX4 464 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 H0YJW9 148 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 GAPDHP04406 335 aaKnown RBP14.95□□□□□ -0.02
USP39-201ENST00000323701 FAM157CP0CG43 387 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 MYOD1P15172 320 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 COX7A1P24310 79 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 CTAG1AP78358 180 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 LDLRAD2Q5SZI1 272 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 OR4A47Q6IF82 309 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 ATRAIDQ6UW56 229 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 UBAC2Q8NBM4 344 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 RAB39BQ96DA2 213 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 ADTRPQ96IZ2 230 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 PTPN13Q12923 2485 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 JTBO76095 146 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 METTL15P1P0C7V9 234 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 SPANXN5Q5MJ07 72 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 OR13D1Q8NGV5 346 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 SMIM8Q96KF7 97 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 SH3BGRL3Q9H299 93 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 SIRT7Q9NRC8 400 aa14.95□□□□□ -0.02
USP39-201ENST00000323701 LOC105371242A0A075B767 164 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 LIPFP07098 398 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 ZNF137PP52743 207 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 RPS16P62249 146 aaKnown RBP14.94□□□□□ -0.02
USP39-201ENST00000323701 RPL23AP62750 156 aaKnown RBP14.94□□□□□ -0.02
USP39-201ENST00000323701 OR5AN1Q8NGI8 311 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 CCL19Q99731 98 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 NABP2Q9BQ15 211 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 SLC25A31Q9H0C2 315 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 ARV1Q9H2C2 271 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 ZFHX3Q15911 3703 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 ABCA12Q86UK0 2595 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 IGHV2-5P01817 119 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 AARDQ4LEZ3 155 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 RITA1Q96K30 269 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 OR4C12Q96R67 309 aa14.94□□□□□ -0.02
USP39-201ENST00000323701 HSD17B11Q8NBQ5 300 aa14.93□□□□□ -0.02
USP39-201ENST00000323701 TMEM186Q96B77 213 aa14.93□□□□□ -0.02
USP39-201ENST00000323701 ABCA2Q9BZC7 2435 aa14.93□□□□□ -0.02
USP39-201ENST00000323701 IGHV3-72A0A0B4J1Y9 119 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 SULT1A1P50225 295 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 ERVK-16P61578 105 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 HLA-DRB5Q30154 266 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 PNKDQ8N490 385 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 BPIFCQ8NFQ6 507 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 OR4P4Q8NGL7 312 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 OR1S2Q8NGQ3 325 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 DTD1Q8TEA8 209 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 CLEC7AQ9BXN2 247 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 H7C2Y5 167 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms