RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 RPL5P46777 297 aaKnown RBP13.23□□□□□ -0.29
EXOSC4-201ENST00000316052 RHOGP84095 191 aa13.23□□□□□ -0.29
EXOSC4-201ENST00000316052 LCN12Q6JVE5 192 aa13.23□□□□□ -0.29
EXOSC4-201ENST00000316052 Q8N402 240 aa13.23□□□□□ -0.29
EXOSC4-201ENST00000316052 TRBV9A0A0B4J1U6 114 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 TRAV1-2A0A0B4J238 106 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 IFITM5A6NNB3 132 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 J3QRK9 145 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 GADD45AP24522 165 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 RANBP1P43487 201 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 Q6ZS49 121 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 GTSCR1Q86UQ5 136 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 ACOT12Q8WYK0 555 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 ADTRPQ96IZ2 230 aa13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
EXOSC4-201ENST00000316052 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 RAB6AP20340 208 aa13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 ATP5G2Q06055 141 aa13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 ARFRP1Q13795 201 aa13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 C10orf55Q5SWW7 151 aa13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 LINC00322Q6ZN03 302 aaPredicted RBP13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 OSR1Q8TAX0 266 aaPredicted RBP13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 RETNQ9HD89 108 aa13.21□□□□□ -0.29
EXOSC4-201ENST00000316052 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 ZNF785A8K8V0 405 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 PDCD5O14737 125 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 MPPED1O15442 326 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 IFNA6P05013 189 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 SAA1P0DJI8 122 aaPredicted RBP13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 TALDO1P37837 337 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 ALDH3B2P48448 385 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 RPL30P62888 115 aaKnown RBP13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 EXOSC2Q13868 293 aaKnown RBP13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 CD300EQ496F6 205 aaPredicted RBP13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 ZNF773Q6PK81 442 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 TTC9CQ8N5M4 171 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 PLEKHA3Q9HB20 300 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 PEMTQ9UBM1 199 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 DMRT1Q9Y5R6 373 aa13.2□□□□□ -0.3
EXOSC4-201ENST00000316052 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 FCGR3BO75015 233 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 IGLV2-14P01704 120 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 EDN2P20800 178 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 CDK10Q15131 360 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 OR2K2Q8NGT1 345 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 HIPK2Q9H2X6 1198 aa13.19□□□□□ -0.3
EXOSC4-201ENST00000316052 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 HMX3A6NHT5 357 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 PPP5D1E7EU14 171 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 AIREO43918 545 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 OR2J3O76001 311 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 HLA-AP01891 365 aaKnown RBP13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 CD7P09564 240 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 RAB3BP20337 219 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 NFYAP23511 347 aaPredicted RBP13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 CD81P60033 236 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 TBCEQ15813 527 aaPredicted RBP13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 CDNFQ49AH0 187 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 OR2B11Q5JQS5 317 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 ZNF367Q7RTV3 350 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 MMD2Q8IY49 270 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 VKORC1L1Q8N0U8 176 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 ZNF645Q8N7E2 425 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 NECAP1Q8NC96 275 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 SPIN2AQ99865 258 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 SPIN2BQ9BPZ2 258 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 NEURL2Q9BR09 285 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 DCUN1D5Q9BTE7 237 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 ST6GALNAC5Q9BVH7 336 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 NDUFB11Q9NX14 153 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 CEPT1Q9Y6K0 416 aa13.18□□□□□ -0.3
EXOSC4-201ENST00000316052 IGKV1D-13A0A0B4J2D9 117 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 TRDV1A0A1B0GX56 115 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 SMIM30A4D0T7 59 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 E7EUB6 86 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 ACTL6BO94805 426 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 HLA-DQB1P01920 261 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 IGKV1-13P0DP09 117 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 DTYMKP23919 212 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 MYL9P24844 172 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 DEFB125Q8N687 156 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 WFDC10AQ9H1F0 79 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 VCX3AQ9NNX9 186 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 OR2W1Q9Y3N9 320 aa13.17□□□□□ -0.3
EXOSC4-201ENST00000316052 A0A1B0GW64 132 aa13.16□□□□□ -0.3
EXOSC4-201ENST00000316052 TEX22C9J3V5 150 aa13.16□□□□□ -0.3
EXOSC4-201ENST00000316052 TUSC2O75896 110 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms