RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MKRN2OSH3BPM6 223 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 HPRT1P00492 218 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 IGHV1-46P01743 117 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 P0C879 139 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 MYOD1P15172 320 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 CD40P25942 277 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 PSMB3P49720 205 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 Q8TCH9 128 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 MBD3L1Q8WWY6 194 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 HIPK2Q9H2X6 1198 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 IFI27L2Q9H2X8 130 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 TMEM140Q9NV12 185 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 AURKAIP1Q9NWT8 199 aaPredicted RBP9.56□□□□□ -0.88
PTPN2-201ENST00000309660 TRAV1-1A0A0B4J248 108 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 PRRG2O14669 202 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 RRHO14718 337 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 PAGE4O60829 102 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 YIF1AO95070 293 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 PAX6P26367 422 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 EIF2S3P41091 472 aaKnown RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 MEF2BQ02080 365 aaPredicted RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 ELOBQ15370 118 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 CST9LP1Q5W188 147 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 HEPN1Q6WQI6 88 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 C1orf229Q6ZS94 237 aaPredicted RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 KDF1Q8NAX2 398 aaPredicted RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 RND1Q92730 232 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 RHOVQ96L33 236 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 SSX3Q99909 188 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 GFOD1Q9NXC2 390 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 C5orf52A6NGY3 159 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 A8MXE2 369 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 TNFSF4P23510 183 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 CD1BP29016 333 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 NKX6-1P78426 367 aaPredicted RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 SLC35E3Q7Z769 313 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 SSMEM1Q8WWF3 244 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 TMEM204Q9BSN7 226 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 TP53TG5Q9Y2B4 290 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 IGF2RP11717 2491 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 SAA2-SAA4A0A096LPE2 208 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 A0A1W2PPV4 95 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 C15orf62A8K5M9 175 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 SAA2P0DJI9 122 aaPredicted RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 LOXL3P58215 753 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 MRPS11P82912 194 aaKnown RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 ATP6V1FQ16864 119 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 PDLIM3Q53GG5 364 aaPredicted RBP9.55□□□□□ -0.88
PTPN2-201ENST00000309660 CT45A1Q5HYN5 189 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 IGFL3Q6UXB1 125 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 PRSS33Q8NF86 280 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 CT45A3Q8NHU0 189 aa9.55□□□□□ -0.88
PTPN2-201ENST00000309660 KALRNO60229 2985 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 MMP23AO75900 390 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 PTPRBP23467 1997 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 FOXC1Q12948 553 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 KLF2Q9Y5W3 355 aaPredicted RBP9.54□□□□□ -0.88
PTPN2-201ENST00000309660 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 C17orf112F2Z3M2 114 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 YPEL1O60688 119 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 TRGC2P03986 189 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 CDC34P49427 236 aaPredicted RBP9.54□□□□□ -0.88
PTPN2-201ENST00000309660 CD81P60033 236 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 C1orf174Q8IYL3 243 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 FAM57AQ8TBR7 257 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 CCL17Q92583 94 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 YPEL2Q96QA6 119 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 COL8A2P25067 703 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 TIMP3P35625 211 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 RTP5Q14D33 572 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 WDR25Q64LD2 544 aaPredicted RBP9.54□□□□□ -0.88
PTPN2-201ENST00000309660 TMEM108Q6UXF1 575 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 GFRALQ6UXV0 394 aa9.54□□□□□ -0.88
PTPN2-201ENST00000309660 H1FXQ92522 213 aaKnown RBP9.54□□□□□ -0.88
PTPN2-201ENST00000309660 AP4M1O00189 453 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 REG1BP48304 166 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 C17orf58Q2M2W7 97 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 SP5Q6BEB4 398 aaPredicted RBP9.53□□□□□ -0.88
PTPN2-201ENST00000309660 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 OR51G1Q8NGK1 321 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 NIT2Q9NQR4 276 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 A0A0G2JNJ9 132 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 CCKARP32238 428 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 MIC13Q5XKP0 118 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 OR4S2Q8NH73 311 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 ENY2Q9NPA8 101 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 Q9UFV3 132 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 TCF19Q9Y242 345 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
PTPN2-201ENST00000309660 KBTBD11-OT1A0A1B0GTJ5 212 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 C16orf97H3BN30 126 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 CLDN34H7C241 214 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 MBP02144 154 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 OR4A8P0C604 315 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 SPCS3P61009 180 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 PRR30Q53SZ7 412 aaPredicted RBP9.52□□□□□ -0.88
PTPN2-201ENST00000309660 DOLPP1Q86YN1 238 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms