RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF611Q8N823 705 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 HSD17B11Q8NBQ5 300 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 OR52M1Q8NGK5 317 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 CD300LFQ8TDQ1 290 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 MBD3L1Q8WWY6 194 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 LSM10Q969L4 123 aaKnown RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 BSCL2Q96G97 398 aaPredicted RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 RAB40CQ96S21 281 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 TP53RKQ96S44 253 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ATP5SQ99766 215 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 NIPSNAP3BQ9BS92 247 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 PSMG3Q9BT73 122 aaPredicted RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 LINC00470Q9BZP3 86 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 OR2H1Q9GZK4 316 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 CTDSP1Q9GZU7 261 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 TOLLIPQ9H0E2 274 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 WNT5BQ9H1J7 359 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF442Q9H7R0 627 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 Q9N2K0 584 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 LAMP3Q9UQV4 416 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 UBE2J1Q9Y385 318 aaPredicted RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ARHGAP32A7KAX9 2087 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 TRBV24-1A0A075B6N3 115 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 IGHV4-30-2A0A087WSY4 118 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 IGKV3D-15A0A087WSY6 115 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 LOC102723971A0A1B0GUV8 181 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 A0A1W2PPE2 198 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 A0A1W2PPE3 182 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 FAM24AA6NFZ4 105 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF724A8MTY0 619 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 FAM90A26D6RGX4 464 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 H3BQ15 152 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 SPRY1O43609 319 aaPredicted RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ANGPTL7O43827 346 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CD5LO43866 347 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CYTIPO60759 359 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CLN5O75503 358 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 IFNA5P01569 189 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 OPN1LWP04000 364 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 MMP7P09237 267 aaPredicted RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 OR13C7P0DN81 318 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 NQO2P16083 231 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF32P17041 273 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 S100A2P29034 98 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 APLNRP35414 380 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CDKN1AP38936 164 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CARD18P57730 90 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 FGF12P61328 243 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 RPL23AP62750 156 aaKnown RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 HLA-DRB3P79483 266 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 PSG4Q00888 419 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 PIGYQ3MUY2 71 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 PHLDA2Q53GA4 152 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 PLCXD3Q63HM9 321 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF774Q6NX45 483 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF880Q6PDB4 577 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 RBMS3Q6XE24 437 aaKnown RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 MOB1BQ7L9L4 216 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 SLC16A13Q7RTY0 426 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 P4HA3Q7Z4N8 544 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 TBC1D26Q86UD7 250 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 STX12Q86Y82 276 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 OR5A2Q8NGI9 324 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 OR5L1Q8NGL2 311 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 OR2AE1Q8NHA4 323 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 OR2V1Q8NHB1 315 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CLDND2Q8NHS1 167 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 PLPPR1Q8TBJ4 325 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM171Q8WVE6 324 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CPNE4Q96A23 557 aaPredicted RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ISOC2Q96AB3 205 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 PINX1Q96BK5 328 aaKnown RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 RAB39BQ96DA2 213 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ADGRG7Q96K78 797 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CABLES2Q9BTV7 478 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 SH3BGRL3Q9H299 93 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CRLF2Q9HC73 371 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 GPR35Q9HC97 309 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 PLSCR4Q9NRQ2 329 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 SLC7A10Q9NS82 523 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 GAR1Q9NY12 217 aaKnown RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 ELOVL5Q9NYP7 299 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 CISD1Q9NZ45 108 aaKnown RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 MIOXQ9UGB7 285 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 NOSIPQ9Y314 301 aaKnown RBP4.06□□□□□ -1.76
CKS1B-201ENST00000308987 FBXO7Q9Y3I1 522 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 RNF115Q9Y4L5 304 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 WSB1Q9Y6I7 421 aa4.06□□□□□ -1.76
CKS1B-201ENST00000308987 WNK1Q9H4A3 2382 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 hCG_1809904A0A1W2PP81 198 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 A0A1W2PR64 198 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 A0A1W2PRV1 198 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 DPRXA6NFQ7 191 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 OR5B21A6NL26 309 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF587BE7ETH6 402 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TRAPPC2LH3BP13 241 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 CLDN34H7C241 214 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TNFSF11O14788 317 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 DEGS1O15121 323 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TXNL1O43396 289 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms