RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
LEMD3-201ENST00000308330 MAP1LC3AQ9H492 121 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 TAAR3PQ9P1P4 343 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 ST6GALNAC2Q9UJ37 374 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 SCN5AQ14524 2016 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 KIR2DS1A0A191URI9 304 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 C3orf85A0A1B0GTC6 90 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 AMY1AP04745 511 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 CT45A10P0DMU9 189 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 KIR2DS4P43632 304 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 KIR2DS1Q14954 304 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 DMRTC1Q5HYR2 192 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 HOGA1Q86XE5 327 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 CALHM1Q8IU99 346 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 OR4A16Q8NH70 328 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 C4orf45Q96LM5 186 aa13.17□□□□□ -0.3
LEMD3-201ENST00000308330 C1QTNF9BB2RNN3 333 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 WDR38Q5JTN6 314 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 TMEM252Q8N6L7 170 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 NOXO1Q8NFA2 376 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 ZNF324O75467 553 aaPredicted RBP13.16□□□□□ -0.3
LEMD3-201ENST00000308330 ICAM4Q14773 271 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 TM4SF20Q53R12 229 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 CTHRC1Q96CG8 243 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 SIGLEC7Q9Y286 467 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 SP1P08047 785 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 CELA2AP08217 269 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 KCNMB1Q16558 191 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 GCSAMLQ5JQS6 135 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 LINC00470Q9BZP3 86 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 GPR132Q9UNW8 380 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 ZFP36L2P47974 494 aaKnown RBP13.16□□□□□ -0.3
LEMD3-201ENST00000308330 GFRA1P56159 465 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 CLDND2Q8NHS1 167 aa13.16□□□□□ -0.3
LEMD3-201ENST00000308330 HS3ST1O14792 307 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 IGLC2P0DOY2 106 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 IGLC3P0DOY3 106 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
LEMD3-201ENST00000308330 C1QL3Q5VWW1 255 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 ZAR1Q86SH2 424 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 PIKFYVEQ9Y2I7 2098 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 SAP30O75446 220 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 ZNF883P0CG24 379 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 IL3RAP26951 378 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 C9orf40Q8IXQ3 194 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 RDH5Q92781 318 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 ZNF764Q96H86 408 aaPredicted RBP13.15□□□□□ -0.3
LEMD3-201ENST00000308330 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 CKAP5Q14008 2032 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 PTGER4P35408 488 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 ALKBH6Q3KRA9 238 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 R4GMQ9 66 aa13.15□□□□□ -0.3
LEMD3-201ENST00000308330 MDC1Q14676 2089 aaKnown RBP13.15□□□□□ -0.3
LEMD3-201ENST00000308330 TRAV8-7A0A075B6U6 113 aa13.15□□□□□ -0.31
LEMD3-201ENST00000308330 A0A1B0GTH9 108 aa13.15□□□□□ -0.31
LEMD3-201ENST00000308330 FAM231BA6NCW3 169 aa13.15□□□□□ -0.31
LEMD3-201ENST00000308330 K7ESF4 209 aa13.15□□□□□ -0.31
LEMD3-201ENST00000308330 SPINT2O43291 252 aa13.15□□□□□ -0.31
LEMD3-201ENST00000308330 SRSF10O75494 262 aaKnown RBP13.15□□□□□ -0.31
LEMD3-201ENST00000308330 FBXL14Q8N1E6 418 aa13.15□□□□□ -0.31
LEMD3-201ENST00000308330 RNF126Q9BV68 326 aa13.15□□□□□ -0.31
LEMD3-201ENST00000308330 PCNX1Q96RV3 2341 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 C1orf122Q6ZSJ8 110 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 Q6ZVH6 145 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 H2BFWTQ7Z2G1 175 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 TMEM56-RWDD3S4R434 201 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 TSPO2Q5TGU0 170 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 MMD2Q8IY49 270 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
LEMD3-201ENST00000308330 DSPPQ9NZW4 1301 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 CCL21O00585 134 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 SPRY3O43610 288 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 ACSM6Q6P461 480 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 WDR82Q6UXN9 313 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 NPEPL1Q8NDH3 523 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
LEMD3-201ENST00000308330 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
LEMD3-201ENST00000308330 IGLV3-19P01714 112 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 ZNF121P58317 390 aaPredicted RBP13.13□□□□□ -0.31
LEMD3-201ENST00000308330 POU2AF1Q16633 256 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 MS4A5Q9H3V2 200 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 OR2W1Q9Y3N9 320 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 FAM208BQ5VWN6 2430 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 C5orf47Q569G3 176 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 BMPERQ8N8U9 685 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 OR1K1Q8NGR3 316 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 OR1F12Q8NHA8 337 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 FAM234AQ9H0X4 552 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 ARHGEF17Q96PE2 2063 aaPredicted RBP13.13□□□□□ -0.31
LEMD3-201ENST00000308330 C9JQL5 133 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 PATE4P0C8F1 98 aa13.13□□□□□ -0.31
LEMD3-201ENST00000308330 RPL7P18124 248 aaKnown RBP13.13□□□□□ -0.31
LEMD3-201ENST00000308330 RPL23P62829 140 aaKnown RBP13.13□□□□□ -0.31
LEMD3-201ENST00000308330 RER1O15258 196 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms