RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 Q8N7P7 452 aa13.82□□□□□ -0.2
SSH3-201ENST00000308127 KALRNO60229 2985 aa13.82□□□□□ -0.2
SSH3-201ENST00000308127 SP1P08047 785 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 CNN1P51911 297 aaKnown RBP13.81□□□□□ -0.2
SSH3-201ENST00000308127 R3HDM4Q96D70 268 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 FAM122AQ96E09 287 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 TIMM9Q9Y5J7 89 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 IGHV3OR15-7A0A075B7D8 119 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 FAM90A26D6RGX4 464 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 CD1BP29016 333 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 FOXF2Q12947 444 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 HEYLQ9NQ87 328 aaPredicted RBP13.81□□□□□ -0.2
SSH3-201ENST00000308127 MANBALQ9NQG1 85 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 ZNF705FA8MVS1 300 aaPredicted RBP13.81□□□□□ -0.2
SSH3-201ENST00000308127 PROP1O75360 226 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 ZNF705DP0CH99 300 aaPredicted RBP13.81□□□□□ -0.2
SSH3-201ENST00000308127 ZNF705BP0CI00 300 aaPredicted RBP13.81□□□□□ -0.2
SSH3-201ENST00000308127 CBLN1P23435 193 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 CASP6P55212 293 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 TDRG1Q3Y452 100 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 C11orf53Q8IXP5 236 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 NANOS1Q8WY41 292 aaKnown RBP13.81□□□□□ -0.2
SSH3-201ENST00000308127 TMEM18Q96B42 140 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 HINT2Q9BX68 163 aa13.81□□□□□ -0.2
SSH3-201ENST00000308127 PRAMEF5Q5TYX0 476 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 Q8TCH9 128 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 LURAP1Q96LR2 239 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 KMT2EQ8IZD2 1858 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 F2Z2F3 143 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 GGCTO75223 188 aaKnown RBP13.8□□□□□ -0.2
SSH3-201ENST00000308127 TACC2O95359 2948 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 CLDN14O95500 239 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 TPRP12270 2363 aaKnown RBP13.8□□□□□ -0.2
SSH3-201ENST00000308127 ZNF766Q5HY98 468 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 TGIF2LYQ8IUE0 185 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 ARRDC1-AS1Q9H2J1 176 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 ABI3Q9P2A4 366 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 GNG12Q9UBI6 72 aa13.8□□□□□ -0.2
SSH3-201ENST00000308127 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 ADMP35318 185 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 HLA-DRB5Q30154 266 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 ACOT6Q3I5F7 207 aaPredicted RBP13.79□□□□□ -0.2
SSH3-201ENST00000308127 CENPVQ7Z7K6 275 aaPredicted RBP13.79□□□□□ -0.2
SSH3-201ENST00000308127 Q8IYB0 196 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 NDUFAF3Q9BU61 184 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 MS4A5Q9H3V2 200 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 ABCA1O95477 2261 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 OOEPA6NGQ2 149 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 M0R1X1 148 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 TIMM8AO60220 97 aaPredicted RBP13.79□□□□□ -0.2
SSH3-201ENST00000308127 ACTL6BO94805 426 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 MBP02144 154 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 SLC35B1P78383 322 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 EIF4EBP1Q13541 118 aaPredicted RBP13.79□□□□□ -0.2
SSH3-201ENST00000308127 KCNIP4Q6PIL6 250 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 RNASEH2CQ8TDP1 164 aaKnown RBP13.79□□□□□ -0.2
SSH3-201ENST00000308127 ANAPC16Q96DE5 110 aa13.79□□□□□ -0.2
SSH3-201ENST00000308127 TRGV5A0A0B4J1U4 118 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 MKRN2OSH3BPM6 223 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 FOXH1O75593 365 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 ACSF3Q4G176 576 aaPredicted RBP13.78□□□□□ -0.2
SSH3-201ENST00000308127 SNHG12Q9BXW3 62 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 FKBP11Q9NYL4 201 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 CACNA1HO95180 2353 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 TCAPO15273 167 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 TDGF1P13385 188 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 RPL29P47914 159 aaKnown RBP13.78□□□□□ -0.2
SSH3-201ENST00000308127 FAM201AQ5SY85 155 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 DHRS13Q6UX07 377 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 WDR82Q6UXN9 313 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 GBGT1Q8N5D6 347 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 TRIB1Q96RU8 372 aa13.78□□□□□ -0.2
SSH3-201ENST00000308127 PARD6GQ9BYG4 376 aaPredicted RBP13.78□□□□□ -0.2
SSH3-201ENST00000308127 GPR12P47775 334 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 OR5I1Q13606 314 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 ATP6V1FQ16864 119 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 PDLIM3Q53GG5 364 aaPredicted RBP13.77□□□□□ -0.2
SSH3-201ENST00000308127 SPRNQ5BIV9 151 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 ACP7Q6ZNF0 438 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 OCC1Q8TAD7 63 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 POLR3KQ9Y2Y1 108 aaPredicted RBP13.77□□□□□ -0.2
SSH3-201ENST00000308127 YTHDF2Q9Y5A9 579 aaKnown RBP13.77□□□□□ -0.2
SSH3-201ENST00000308127 TTC28Q96AY4 2481 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 PKDREJQ9NTG1 2253 aa13.77□□□□□ -0.2
SSH3-201ENST00000308127 C17orf112F2Z3M2 114 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 F6UZH7 168 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 RAB29O14966 203 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 SSTP61278 116 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 RPL15P61313 204 aaKnown RBP13.77□□□□□ -0.21
SSH3-201ENST00000308127 SRSF6Q13247 344 aaKnown RBP13.77□□□□□ -0.21
SSH3-201ENST00000308127 MRPL49Q13405 166 aaKnown RBP13.77□□□□□ -0.21
SSH3-201ENST00000308127 TREML4Q6UXN2 200 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 C1orf229Q6ZS94 237 aaPredicted RBP13.77□□□□□ -0.21
SSH3-201ENST00000308127 CD177Q8N6Q3 437 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 ACY3Q96HD9 319 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 MGST2Q99735 147 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 SEPSECSQ9HD40 501 aaKnown RBP13.77□□□□□ -0.21
SSH3-201ENST00000308127 PIGBOS1A0A0B4J2F0 54 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 WNT2P09544 360 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 COA6Q5JTJ3 125 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms