RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
RPUSD4-201ENST00000298317 J3QW42 95 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 STAG3L2P0CL84 134 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 STAG3L3P0CL85 134 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 AMTP48728 403 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF718Q3SXZ3 478 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF497Q6ZNH5 498 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 FAM166BA8MTA8 275 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 REG1AP05451 166 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 EIF4EBP1Q13541 118 aaPredicted RBP11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 DCAF12Q5T6F0 453 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 UNQ5815/PRO19632Q6UWF5 114 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 MMD2Q8IY49 270 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF645Q8N7E2 425 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 UBALD1Q8TB05 177 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 LY96Q9Y6Y9 160 aa11.3□□□□□ -0.6
RPUSD4-201ENST00000298317 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 LAMA1P25391 3075 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 A0A1W2PS18 150 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 C15orf62A8K5M9 175 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 C9JCJ5 164 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 WISP2O76076 250 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 S1PR2O95136 353 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 CCNOP22674 350 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 VEGFBP49765 207 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 EDDM3BP56851 147 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 RPS20P60866 119 aaKnown RBP11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF816Q0VGE8 651 aaPredicted RBP11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 RPEL1Q2QD12 228 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 KLHDC1Q8N7A1 406 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 ZBTB34Q8NCN2 500 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 ST6GALNAC3Q8NDV1 305 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 TMEM204Q9BSN7 226 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 MBNL3Q9NUK0 354 aaKnown RBP11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 TRAPPC2LQ9UL33 140 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 MRPS16Q9Y3D3 137 aaKnown RBP11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 CNTRLQ7Z7A1 2325 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 RRHO14718 337 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 CXCL13O43927 109 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 CXorf1O96002 111 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 MT-ND6P03923 174 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 CD1BP29016 333 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 PRRX1P54821 245 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 TGFBR3Q03167 851 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 C11orf52Q96A22 123 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 V9GYV3 84 aa11.29□□□□□ -0.6
RPUSD4-201ENST00000298317 RAB29O14966 203 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 CCL2P13500 99 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 TSPOP30536 169 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 ZNF83P51522 516 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 NIT1Q86X76 327 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 C5orf49A4QMS7 147 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 DPRXA6NFQ7 191 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 OR5B21A6NL26 309 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 MPDU1O75352 247 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 CLDN14O95500 239 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 SPINK2P20155 84 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 OPRK1P41145 380 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 PKIBQ9C010 78 aa11.28□□□□□ -0.6
RPUSD4-201ENST00000298317 GTF3C1Q12789 2109 aa11.27□□□□□ -0.6
RPUSD4-201ENST00000298317 LOC102723996A0A087X1L8 192 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 AHRRA9YTQ3 701 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 RHBDL1O75783 438 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 CYC1P08574 325 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 PMCHP20382 165 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 GNG3P63215 75 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 SPINK9Q5DT21 86 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 WDR73Q6P4I2 378 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 SYT13Q7L8C5 426 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 SLC25A45Q8N413 288 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 TSTD1Q8NFU3 115 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 WFDC12Q8WWY7 111 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 NAT8BQ9UHF3 227 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 RARRES3Q9UL19 164 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 TRGV10A0A0A0MS01 117 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 IGHV2-26A0A0B4J1V2 119 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 TRAV34A0A0B4J273 112 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 SSR4P51571 173 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 TMEM136Q6ZRR5 245 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 YRDCQ86U90 279 aaKnown RBP11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 OR10D3Q8NH80 312 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 UHRF2Q96PU4 802 aa11.27□□□□□ -0.61
RPUSD4-201ENST00000298317 OR2D2Q9H210 308 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms