RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CBY1Q9Y3M2 126 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 AMTP48728 403 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 MDC1Q14676 2089 aaKnown RBP14.14□□□□□ -0.15
PHRF1-201ENST00000264555 SLC25A17O43808 307 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 SMIM17P0DL12 118 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 GAMTQ14353 236 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 RPL39P5Q59GN2 51 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 PRSS3P2Q8NHM4 247 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 CARHSP1Q9Y2V2 147 aaKnown RBP14.13□□□□□ -0.15
PHRF1-201ENST00000264555 TM4SF5O14894 197 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 NUBP1P53384 320 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 TMEM183BQ1AE95 376 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 MRPL54Q6P161 138 aaKnown RBP14.13□□□□□ -0.15
PHRF1-201ENST00000264555 FAM222BQ8WU58 562 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 ZNF430Q9H8G1 570 aaPredicted RBP14.13□□□□□ -0.15
PHRF1-201ENST00000264555 HILPDAQ9Y5L2 63 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 IGKV1-12A0A0C4DH73 117 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 IGKV1D-12P01611 117 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.13□□□□□ -0.15
PHRF1-201ENST00000264555 IGKV1D-8A0A087WSZ0 117 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 PPIAL4CA0A0B4J2A2 164 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 PPIAL4GP0DN37 164 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 IER3P46695 156 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 RPRMQ9NS64 109 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 MIOXQ9UGB7 285 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 HCP5Q6MZN7 132 aa14.13□□□□□ -0.15
PHRF1-201ENST00000264555 MMP7P09237 267 aaPredicted RBP14.12□□□□□ -0.15
PHRF1-201ENST00000264555 HIST1H1BP16401 226 aaKnown RBP14.12□□□□□ -0.15
PHRF1-201ENST00000264555 COMPP49747 757 aaPredicted RBP14.12□□□□□ -0.15
PHRF1-201ENST00000264555 EIF4E3Q8N5X7 224 aaKnown RBP14.12□□□□□ -0.15
PHRF1-201ENST00000264555 WDR31Q8NA23 367 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 TRAV24A0A0B4J272 114 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 IGKV1D-13A0A0B4J2D9 117 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 C17orf98A8MV24 154 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 SNURFLB1AK76 121 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 IGKV1-13P0DP09 117 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 ZNF506Q5JVG8 444 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 LHFPL1Q86WI0 220 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 ABHD17AQ96GS6 310 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 TRAV20A0A0B4J274 112 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 LRRC75BQ2VPJ9 315 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 APOBEC3AP31941 199 aaPredicted RBP14.12□□□□□ -0.15
PHRF1-201ENST00000264555 ZNF497Q6ZNH5 498 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 C19orf24Q9BVV8 132 aa14.12□□□□□ -0.15
PHRF1-201ENST00000264555 H0YIZ8 118 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 RALYQ9UKM9 306 aaKnown RBP14.11□□□□□ -0.15
PHRF1-201ENST00000264555 F8VVB4 439 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 F8VWA3 439 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 GFRA3O60609 400 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 OR5AU1Q8NGC0 362 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 FAM122AQ96E09 287 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 SRD5A3Q9H8P0 318 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 KBTBD11-OT1A0A1B0GTJ5 212 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 SRSF7Q16629 238 aaKnown RBP eCLIP14.11□□□□□ -0.15
PHRF1-201ENST00000264555 MUC15Q8N387 334 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 NHLRC2Q8NBF2 726 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 STARD4Q96DR4 205 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 RND2P52198 227 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 RIGQ13278 110 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 BIVMQ86UB2 503 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 PRO1933Q9H354 126 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 TMEM106BQ9NUM4 274 aa14.11□□□□□ -0.15
PHRF1-201ENST00000264555 ARL14EPLP0DKL9 152 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 FOXG1P55316 489 aaPredicted RBP14.1□□□□□ -0.15
PHRF1-201ENST00000264555 B3GALT5-AS1P59052 145 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 ZNF788Q6ZQV5 615 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 RCC1LQ96I51 464 aaKnown RBP14.1□□□□□ -0.15
PHRF1-201ENST00000264555 GGACTQ9BVM4 153 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 DNAJC4Q9NNZ3 241 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 TNFRSF19Q9NS68 423 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 KCNMB2Q9Y691 235 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 KLRB1Q12918 225 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 HNRNPA3P51991 378 aaKnown RBP14.1□□□□□ -0.15
PHRF1-201ENST00000264555 QRFPP83859 136 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 SPSB4Q96A44 273 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 SCNM1Q9BWG6 230 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 CLEC7AQ9BXN2 247 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 IGKV1-27A0A075B6S5 117 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 TRGC2P03986 189 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 ETV2O00321 342 aaPredicted RBP14.1□□□□□ -0.15
PHRF1-201ENST00000264555 ISLRO14498 428 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 FAM106CPP0CH98 169 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 C8orf88P0DMB2 117 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 CD81P60033 236 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 ECSCRQ19T08 205 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 SMUG1Q53HV7 270 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 OR5R1Q8NH85 324 aa14.1□□□□□ -0.15
PHRF1-201ENST00000264555 LRTM2Q8N967 370 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 ZNF98A6NK75 572 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 WDR82Q6UXN9 313 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 FOXL2NBQ6ZUU3 175 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 APCSP02743 223 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 FAM201AQ5SY85 155 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 C5orf17Q8NAS9 161 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 OSR1Q8TAX0 266 aaPredicted RBP14.09□□□□□ -0.15
PHRF1-201ENST00000264555 DCTN5Q9BTE1 182 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 NPCDR1Q9BY65 106 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 LPAR2Q9HBW0 351 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 TMEM250H0YL14 139 aa14.09□□□□□ -0.15
PHRF1-201ENST00000264555 OTX1P32242 354 aaPredicted RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms