RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 STPG3Q8N7X2 389 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 YTHDF2Q9Y5A9 579 aaKnown RBP13.86□□□□□ -0.19
VSX2-201ENST00000261980 SH2D7A6NKC9 451 aaPredicted RBP13.86□□□□□ -0.19
VSX2-201ENST00000261980 GPR6P46095 362 aaPredicted RBP13.86□□□□□ -0.19
VSX2-201ENST00000261980 ACSF3Q4G176 576 aaPredicted RBP13.86□□□□□ -0.19
VSX2-201ENST00000261980 STUMQ69YW2 141 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 TMEM14EPQ6UXP3 125 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 TCTEX1D1Q8N7M0 179 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 NEUROG1Q92886 237 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 NUDT11Q96G61 164 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 SSBP3Q9BWW4 388 aaPredicted RBP13.86□□□□□ -0.19
VSX2-201ENST00000261980 TRAPPC2LQ9UL33 140 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 SPTBN2O15020 2390 aa13.86□□□□□ -0.19
VSX2-201ENST00000261980 PDE6DO43924 150 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 FOXH1O75593 365 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 RHBDL1O75783 438 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 SELENOVP59797 346 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 Q5PR19 223 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 ASCL4Q6XD76 172 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 ANKRD37Q7Z713 158 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 NIT1Q86X76 327 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 ZIC4Q8N9L1 334 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 OR2M7Q8NG81 312 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 SRXN1Q9BYN0 137 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 CLEC5AQ9NY25 188 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 IL36BQ9NZH7 164 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 DMXL1Q9Y485 3027 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 ZNF324O75467 553 aaPredicted RBP13.85□□□□□ -0.19
VSX2-201ENST00000261980 IGHV3-13P01766 116 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 IGHV3-7P01780 117 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 TFF1P04155 84 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 LTC4SQ16873 150 aa13.85□□□□□ -0.19
VSX2-201ENST00000261980 RIF1Q5UIP0 2472 aaKnown RBP13.85□□□□□ -0.19
VSX2-201ENST00000261980 S1PR2O95136 353 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 NUDT3O95989 172 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 CD99P14209 185 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 CD24P25063 80 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.84□□□□□ -0.19
VSX2-201ENST00000261980 FAM27BQ5VT28 67 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 DRAM1Q8N682 238 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 C10orf35Q96D05 121 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 AHCTF1Q8WYP5 2266 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 PTPRZ1P23471 2315 aaPredicted RBP13.84□□□□□ -0.19
VSX2-201ENST00000261980 SYNGR4O95473 234 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 MKXQ8IYA7 352 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 KCNS1Q96KK3 526 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 GCM1Q9NP62 436 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
VSX2-201ENST00000261980 A0A0J9YW62 118 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 TMEM238C9JI98 176 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 SRFP11831 508 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 RPL30P62888 115 aaKnown RBP13.83□□□□□ -0.19
VSX2-201ENST00000261980 RPEL1Q2QD12 228 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 C1orf185Q5T7R7 199 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 YRDCQ86U90 279 aaKnown RBP13.83□□□□□ -0.19
VSX2-201ENST00000261980 ZNF439Q8NDP4 499 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 PMCHL2Q9BQD1 86 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 MEGF9Q9H1U4 602 aa13.83□□□□□ -0.19
VSX2-201ENST00000261980 COL4A2P08572 1712 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 TRAV24A0A0B4J272 114 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 TOMM40O96008 361 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 NGFP01138 241 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 CEBPDP49716 269 aaPredicted RBP13.83□□□□□ -0.2
VSX2-201ENST00000261980 SPATA46Q5T0L3 261 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 TMEM42Q69YG0 159 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 RNASEKQ6P5S7 137 aaKnown RBP13.83□□□□□ -0.2
VSX2-201ENST00000261980 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 OR2Y1Q8NGV0 311 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 TSKUQ8WUA8 353 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 SSBP4Q9BWG4 385 aaPredicted RBP13.83□□□□□ -0.2
VSX2-201ENST00000261980 LOC400499M0QZD8 3231 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 DEFB108AA8MXU0 73 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 CELA3BP08861 270 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 CA7P43166 264 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 SUMO3P55854 103 aaPredicted RBP13.83□□□□□ -0.2
VSX2-201ENST00000261980 LGALS4P56470 323 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 MUC21Q5SSG8 566 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 SLC24A4Q8NFF2 622 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 OR2D2Q9H210 308 aa13.83□□□□□ -0.2
VSX2-201ENST00000261980 A0A1W2PN81 502 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 hDV102S1A0JD36 115 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 PRRX1P54821 245 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 FGF12P61328 243 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 RNPS1Q15287 305 aaKnown RBP13.82□□□□□ -0.2
VSX2-201ENST00000261980 C10orf128Q5T292 105 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 PQLC2Q6ZP29 291 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 VKORC1L1Q8N0U8 176 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 DEFB126Q9BYW3 111 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 CSTL1Q9H114 145 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 ZFHX2Q9C0A1 2572 aaPredicted RBP13.82□□□□□ -0.2
VSX2-201ENST00000261980 TMPRSS2O15393 492 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 GATA2P23769 480 aaPredicted RBP13.82□□□□□ -0.2
VSX2-201ENST00000261980 TNXAQ16473 311 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 PDLIM3Q53GG5 364 aaPredicted RBP13.82□□□□□ -0.2
VSX2-201ENST00000261980 SPATA12Q7Z6I5 190 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 GCNT2Q8N0V5 402 aa13.82□□□□□ -0.2
VSX2-201ENST00000261980 TMEM54Q969K7 222 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms