RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ZNF841Q6ZN19 808 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 LOXL4Q96JB6 756 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 IL6RP08887 468 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 CD99P14209 185 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 TIMP3P35625 211 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 FOXG1P55316 489 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 GABRA6Q16445 453 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 FBLN7Q53RD9 439 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 TPPP3Q9BW30 176 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 SSBP4Q9BWG4 385 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 SPTA1P02549 2419 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 MFAP2P55001 183 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 HYAL1Q12794 435 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 SMIM15Q7Z3B0 74 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 NPIPB13A6NJU9 1138 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 NPIPB4C9JG80 1138 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 NUDT3O95989 172 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 ACSF3Q4G176 576 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 ZNF441Q8N8Z8 693 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 OR2D3Q8NGH3 330 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 SSC4DQ8WTU2 575 aa13.44□□□□□ -0.26
PRPF40B-201ENST00000261897 C17orf98A8MV24 154 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 HYPMO75409 117 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 GATA2P23769 480 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 ZNF137PP52743 207 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 GCNT2Q8N0V5 402 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 RCHY1Q96PM5 261 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 HSD17B10Q99714 261 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 CLEC5AQ9NY25 188 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 RNF212BA8MTL3 300 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 RRHO14718 337 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 IGHV3-48P01763 117 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 ERVK-16P61578 105 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 STPG3Q8N7X2 389 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 OR2T6Q8NHC8 308 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 C10orf35Q96D05 121 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 FAM122AQ96E09 287 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 C3orf79P0CE67 100 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 HIST3H3Q16695 136 aa13.43□□□□□ -0.26
PRPF40B-201ENST00000261897 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 SPATA31B1PQ5VZV4 182 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 ZNF826PQ6ZT77 177 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 OR5B3Q8NH48 314 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 GALMQ96C23 342 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 RNF114Q9Y508 228 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 EML6Q6ZMW3 1958 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 TRIOBPQ9H2D6 2365 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 HELTA6NFD8 242 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 CGAP01215 116 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 CFIP05156 583 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 COA6Q5JTJ3 125 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 MED12LQ86YW9 2145 aa13.42□□□□□ -0.26
PRPF40B-201ENST00000261897 MT-CO2P00403 227 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 PSG1P11464 419 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 GFRA1P56159 465 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 GUSBP11Q6P575 273 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 LYG1Q8N1E2 194 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 NTF4P34130 210 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 RAB31Q13636 194 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 BCL2L2Q92843 193 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 OR8B2Q96RD0 313 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 EP300Q09472 2414 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 GJE1A6NN92 205 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 VENTXO95231 258 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 PLGLB1Q02325 96 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 SSX8Q7RTT4 187 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 SPOCK3Q9BQ16 436 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 C20orf144Q9BQM9 153 aa13.41□□□□□ -0.26
PRPF40B-201ENST00000261897 A0A0G2JMM0 328 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 A0A1W2PPB8 328 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 A0A1W2PRS3 328 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 KIR3DP1A8MWS1 328 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 M0R1X1 148 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 KLF3P57682 345 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 MPV17L2Q567V2 206 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 CENPWQ5EE01 88 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 C1orf174Q8IYL3 243 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 PYGO2Q9BRQ0 406 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 APCSP02743 223 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 TNFSF4P23510 183 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 GNG3P63215 75 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 ZIC4Q8N9L1 334 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 DCTN5Q9BTE1 182 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 TRBV20OR9-2A0A075B6H5 130 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 PIAS2O75928 621 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 CD24P25063 80 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 CD27P26842 260 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 DSCR4P56555 118 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 ALKBH6Q3KRA9 238 aa13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 WDR74Q6RFH5 385 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-201ENST00000261897 TRAV24A0A0B4J272 114 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 SH2D7A6NKC9 451 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 OR2H2O95918 312 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 PLAUP00749 431 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 KCNMB1Q16558 191 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 ZNF585BQ52M93 769 aa13.39□□□□□ -0.27
PRPF40B-201ENST00000261897 ZNF324BQ6AW86 544 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms