RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 TMEM167BQ9NRX6 74 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 PLSCR2Q9NRY7 297 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 UBE2CO00762 179 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 PTGDSP41222 190 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ID3Q02535 119 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 TNFRSF9Q07011 255 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 SPEM2Q0P670 501 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 P2RY6Q15077 328 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 PMS2CLQ68D20 193 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 INO80CQ6PI98 192 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF600Q6ZNG1 722 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 KLHDC1Q8N7A1 406 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 hADV38S2A0JD32 116 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BKO60814 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 SCGB2A1O75556 95 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 CXorf1O96002 111 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BJP06899 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BOP23527 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 CHRNB4P30926 498 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BBP33778 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BDP58876 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 BPIFB3P59826 476 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BCP62807 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST2H2BEQ16778 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM216AQ8WUB2 273 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM131CQ96AQ9 280 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 TRAV24A0A0B4J272 114 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 TCF21O43680 179 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 STARD4Q96DR4 205 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 CCL13Q99616 98 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 PAXXQ9BUH6 204 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 PLAUP00749 431 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 OPRK1P41145 380 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 KLF3P57682 345 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 SCGB2A2Q13296 93 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 CCL17Q92583 94 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HIF1ANQ9NWT6 349 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 OR6C3Q9NZP0 311 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 RAB29O14966 203 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 NKX2-8O15522 239 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ZG16O60844 167 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 CTSSP25774 331 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ATP5G3P48201 142 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ARSJQ5FYB0 599 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 RND1Q92730 232 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 LSM10Q969L4 123 aaKnown RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 KLK10O43240 276 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 AGAP20933 346 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 MFAP2P55001 183 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 AARDQ4LEZ3 155 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 MRPL14Q6P1L8 145 aaKnown RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 RPL23P62829 140 aaKnown RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 OR5I1Q13606 314 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 DNM1P46Q6ZS02 220 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 DOLPP1Q86YN1 238 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 KLF14Q8TD94 323 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ITLN1Q8WWA0 313 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ADTRPQ96IZ2 230 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 SDF2L1Q9HCN8 221 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 RNF7Q9UBF6 113 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 C12orf77C9JDV5 145 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 SLC17A3O00476 420 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 PDE6DO43924 150 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 NAPSAO96009 420 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 CRYGSP22914 178 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 PQLC2Q6ZP29 291 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 OR2D3Q8NGH3 330 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 SGK494Q96LW2 274 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 CSRP1P21291 193 aaKnown RBP3.9□□□□□ -1.78
VPS13C-201ENST00000249837 OTX1P32242 354 aaPredicted RBP3.9□□□□□ -1.78
VPS13C-201ENST00000249837 RAB7AP51149 207 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 RPL39P5Q59GN2 51 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 CENPWQ5EE01 88 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 PLPPR1Q8TBJ4 325 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 BARX1Q9HBU1 254 aaPredicted RBP3.9□□□□□ -1.78
VPS13C-201ENST00000249837 TMEM140Q9NV12 185 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 H3BTX0 84 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 LYL1P12980 280 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 NABP1Q96AH0 204 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 WDR61Q9GZS3 305 aaKnown RBP3.9□□□□□ -1.78
VPS13C-201ENST00000249837 C1QTNF9BB2RNN3 333 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 UCP2P55851 309 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 LRRC10Q5BKY1 277 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 FAM162BQ5T6X4 162 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 TUBA4BQ9H853 241 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 FOXJ2Q9P0K8 574 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 PRNDQ9UKY0 176 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 TCF19Q9Y242 345 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 PRRG2O14669 202 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 RAMP3O60896 148 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 PSG7Q13046 419 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 ETFRF1Q6IPR1 90 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 DEFB123Q8N688 67 aa3.9□□□□□ -1.78
VPS13C-201ENST00000249837 COL4A4P53420 1690 aaPredicted RBP3.9□□□□□ -1.79
VPS13C-201ENST00000249837 M0R2Z0 102 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 NDUFS6O75380 124 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms