RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 CEACAM18A8MTB9 384 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 CEACAM1P13688 526 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 IGHV2-70P01814 119 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 CKS2P33552 79 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 DLX1P56177 255 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 SLC25A40Q8TBP6 338 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 HIGD1AQ9Y241 93 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
HCFC2-201ENST00000229330 LYPD3O95274 346 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 SELENOTP62341 195 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 HBBP68871 147 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 TWIST1Q15672 202 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 SCO2A0A1W2PP80 73 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 TMEM189A5PLL7 270 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 CCL4P13236 92 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 SRSF4Q08170 494 aaKnown RBP11.79□□□□□ -0.52
HCFC2-201ENST00000229330 GRAMD2BQ96HH9 432 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 AKIRIN1Q9H9L7 192 aaPredicted RBP11.79□□□□□ -0.52
HCFC2-201ENST00000229330 THYN1Q9P016 225 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 TMEM56-RWDD3S4R434 201 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 SNCGO76070 127 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 FAM222BQ8WU58 562 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
HCFC2-201ENST00000229330 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 ZNF841Q6ZN19 808 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 TPRX1Q8N7U7 411 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 IGLV3-21P80748 117 aaPredicted RBP11.79□□□□□ -0.52
HCFC2-201ENST00000229330 HOXA4Q00056 320 aaPredicted RBP11.79□□□□□ -0.52
HCFC2-201ENST00000229330 SLC22A18ASQ8N1D0 253 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 ZNF664Q8N3J9 261 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 DRAM1Q8N682 238 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 STPG3Q8N7X2 389 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 SFXN3Q9BWM7 321 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 AICDAQ9GZX7 198 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 SPCS1Q9Y6A9 102 aa11.79□□□□□ -0.52
HCFC2-201ENST00000229330 PATE3B3GLJ2 98 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 NEU1Q99519 415 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 C19orf24Q9BVV8 132 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 PRRX1P54821 245 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 FOXA3P55318 350 aaPredicted RBP11.78□□□□□ -0.52
HCFC2-201ENST00000229330 TFF3Q07654 80 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 HSPB7Q9UBY9 170 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 GBF1Q92538 1859 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 NABP2Q9BQ15 211 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 A0A1W2PRS3 328 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 TRIP6Q15654 476 aaKnown RBP11.78□□□□□ -0.52
HCFC2-201ENST00000229330 PAQR4Q8N4S7 273 aaPredicted RBP11.78□□□□□ -0.52
HCFC2-201ENST00000229330 TMEM208Q9BTX3 173 aa11.78□□□□□ -0.52
HCFC2-201ENST00000229330 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.52
HCFC2-201ENST00000229330 TRAV17A0A0B4J275 112 aa11.77□□□□□ -0.52
HCFC2-201ENST00000229330 KLK10O43240 276 aa11.77□□□□□ -0.52
HCFC2-201ENST00000229330 GNG7O60262 68 aa11.77□□□□□ -0.52
HCFC2-201ENST00000229330 CA7P43166 264 aa11.77□□□□□ -0.52
HCFC2-201ENST00000229330 PKIBQ9C010 78 aa11.77□□□□□ -0.52
HCFC2-201ENST00000229330 IGHV5-10-1A0A0J9YXX1 117 aa11.77□□□□□ -0.52
HCFC2-201ENST00000229330 PLAUP00749 431 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 SSTR5P35346 364 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 HSPE1P61604 102 aaKnown RBP11.77□□□□□ -0.53
HCFC2-201ENST00000229330 FOXC1Q12948 553 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 ZNF658BQ4V348 819 aaPredicted RBP11.77□□□□□ -0.53
HCFC2-201ENST00000229330 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 TET1Q8NFU7 2136 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 SNAI2O43623 268 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 C1QTNF9P0C862 333 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 SOX8P57073 446 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 MOGAT3Q86VF5 341 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 IGKV1D-43A0A0B4J1Z2 117 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 M0R3E3 92 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 LDLRAD4O15165 306 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 SPINK14Q6IE38 97 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.53
HCFC2-201ENST00000229330 CT55Q8WUE5 264 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 JKAMPQ9P055 326 aa11.77□□□□□ -0.53
HCFC2-201ENST00000229330 SLC25A17O43808 307 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 PRDX2P32119 198 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 ZNF716A6NP11 495 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 C1QTNF9BB2RNN3 333 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 DLL1O00548 723 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 IL6RP08887 468 aaPredicted RBP11.76□□□□□ -0.53
HCFC2-201ENST00000229330 RIPPLY3P57055 190 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 MDP1Q86V88 176 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 MBD3L1Q8WWY6 194 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
HCFC2-201ENST00000229330 ZNF256Q9Y2P7 627 aaPredicted RBP11.76□□□□□ -0.53
HCFC2-201ENST00000229330 RRHO14718 337 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
HCFC2-201ENST00000229330 NUDT11Q96G61 164 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 TCF19Q9Y242 345 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 KRTCAP3Q53RY4 240 aa11.76□□□□□ -0.53
HCFC2-201ENST00000229330 C17orf51A8MQB3 221 aa11.75□□□□□ -0.53
HCFC2-201ENST00000229330 EREGO14944 169 aa11.75□□□□□ -0.53
HCFC2-201ENST00000229330 ATXN7O15265 892 aaPredicted RBP11.75□□□□□ -0.53
HCFC2-201ENST00000229330 ZNF324O75467 553 aaPredicted RBP11.75□□□□□ -0.53
HCFC2-201ENST00000229330 TDGF1P3P51864 188 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms