RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 EGLN1Q9GZT9 426 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 SLC35D1Q9NTN3 355 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 JPT1Q9UK76 154 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 ABCA4P78363 2273 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 LY86O95711 162 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 ZNF90Q03938 601 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 PXMP4Q9Y6I8 212 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 LINC00473A8K010 186 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 GATAD1Q8WUU5 269 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 CCL17Q92583 94 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 FUT9Q9Y231 359 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 ZNF705FA8MVS1 300 aaPredicted RBP12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 KIR2DS2P43631 304 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 NCKAP5O14513 1909 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 ADAMTS20P59510 1910 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 TMEM108Q6UXF1 575 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 WDR31Q8NA23 367 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 CORO2AQ92828 525 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 MEGF10Q96KG7 1140 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 TCF19Q9Y242 345 aa12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 SPTBN1Q01082 2364 aaKnown RBP12.49□□□□□ -0.41
UBE2D4-201ENST00000222402 MGST1P10620 155 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 SELLP14151 372 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 DAZAP2Q15038 168 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 ZNF383Q8NA42 475 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 PACRGQ96M98 296 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 PRO1933Q9H354 126 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 SCGB1D1O95968 90 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 RHOBP62745 196 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 C1orf174Q8IYL3 243 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 CD177Q8N6Q3 437 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 OR4P4Q8NGL7 312 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 ELOA3CA0A087WX78 387 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 IGKV3-15P01624 115 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 FAM3BP58499 235 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 HAPLN4Q86UW8 402 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
UBE2D4-201ENST00000222402 hADV38S2A0JD32 116 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 TMEM250H0YL14 139 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 OR9G9P0C7N8 305 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 GCSAMLQ5JQS6 135 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 CYP2G1PQ6ZSU1 146 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 SLC24A4Q8NFF2 622 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 BTF3L4Q96K17 158 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 OR51M1Q9H341 326 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 GSN-AS1Q9NRJ2 163 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 TRBV23-1A0A0A0MS06 115 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 LINC00587B1AMM8 73 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 IGHG3P01860 377 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 FAM27E3Q08E93 113 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 TEPPQ6URK8 271 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 SPNS3Q6ZMD2 512 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 Q6ZR03 302 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 SLC35E1Q96K37 410 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 ZNF71Q9NQZ8 489 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 TRAPPC1Q9Y5R8 145 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 ZGRF1Q86YA3 2104 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 WISP2O76076 250 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HOXA5P20719 270 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 GLRXP35754 106 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 C1orf185Q5T7R7 199 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 FAM90A2PQ658T7 463 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 ANAPC16Q96DE5 110 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 ADTRPQ96IZ2 230 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
UBE2D4-201ENST00000222402 J3QR06 171 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 DUTP33316 252 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 REG1BP48304 166 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 THBS3P49746 956 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 MORN2Q502X0 79 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 STARD4Q96DR4 205 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 PITPNC1Q9UKF7 332 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 PDE6DO43924 150 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 ERHP84090 104 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 ZNF726P1Q15940 193 aa12.46□□□□□ -0.41
UBE2D4-201ENST00000222402 GFRALQ6UXV0 394 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms