RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 PRAMEF5Q5TYX0 476 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 OR4A16Q8NH70 328 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 FAM222BQ8WU58 562 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 DDB2Q92466 427 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 PLPPR2Q96GM1 343 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 SSX3Q99909 188 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 GGACTQ9BVM4 153 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 GSN-AS1Q9NRJ2 163 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 CALYQ9NYX4 217 aa14.33□□□□□ -0.11
CLDN11-201ENST00000064724 PHOX2AO14813 284 aa14.33□□□□□ -0.12
CLDN11-201ENST00000064724 MPDU1O75352 247 aa14.33□□□□□ -0.12
CLDN11-201ENST00000064724 Q6ZS92 163 aa14.33□□□□□ -0.12
CLDN11-201ENST00000064724 S1PR3Q99500 378 aa14.33□□□□□ -0.12
CLDN11-201ENST00000064724 OR51M1Q9H341 326 aa14.33□□□□□ -0.12
CLDN11-201ENST00000064724 FABP1P07148 127 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 TIMP3P35625 211 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 EDDM3BP56851 147 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 ERVK-16P61578 105 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 RELBQ01201 579 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 ABHD5Q8WTS1 349 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 GATAD1Q8WUU5 269 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 ITLN1Q8WWA0 313 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 RAB1CQ92928 201 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 PARLQ9H300 379 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 SMCO3A2RU48 225 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 PRSS46E5RG02 174 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 CDC34P49427 236 aaPredicted RBP14.32□□□□□ -0.12
CLDN11-201ENST00000064724 RAB7AP51149 207 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 RPL23P62829 140 aaKnown RBP14.32□□□□□ -0.12
CLDN11-201ENST00000064724 TLE1Q04724 770 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 ADIRFQ15847 76 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 C17orf58Q2M2W7 97 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 BSXQ3C1V8 233 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 RPUSD4Q96CM3 377 aaKnown RBP14.32□□□□□ -0.12
CLDN11-201ENST00000064724 PYGO2Q9BRQ0 406 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 RAB9BQ9NP90 201 aa14.32□□□□□ -0.12
CLDN11-201ENST00000064724 SPRY3O43610 288 aa14.31□□□□□ -0.12
CLDN11-201ENST00000064724 PFN1P07737 140 aaKnown RBP14.31□□□□□ -0.12
CLDN11-201ENST00000064724 C1orf185Q5T7R7 199 aa14.31□□□□□ -0.12
CLDN11-201ENST00000064724 SPNS3Q6ZMD2 512 aa14.31□□□□□ -0.12
CLDN11-201ENST00000064724 SSX9Q7RTT3 188 aa14.31□□□□□ -0.12
CLDN11-201ENST00000064724 RPRMLQ8N4K4 120 aa14.31□□□□□ -0.12
CLDN11-201ENST00000064724 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.31□□□□□ -0.12
CLDN11-201ENST00000064724 OR4F5Q8NH21 305 aa14.31□□□□□ -0.12
CLDN11-201ENST00000064724 OR4F4Q96R69 305 aa14.31□□□□□ -0.12
CLDN11-201ENST00000064724 GFRA3O60609 400 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 PAGE4O60829 102 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 IFNA10P01566 189 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 ALKBH2Q6NS38 261 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 C1orf229Q6ZS94 237 aaPredicted RBP14.3□□□□□ -0.12
CLDN11-201ENST00000064724 NEIL1Q96FI4 390 aaPredicted RBP14.3□□□□□ -0.12
CLDN11-201ENST00000064724 SDSLQ96GA7 329 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 GFOD1Q9NXC2 390 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 HEATR1Q9H583 2144 aaKnown RBP14.3□□□□□ -0.12
CLDN11-201ENST00000064724 KBTBD11-OT1A0A1B0GTJ5 212 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 RRHO14718 337 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 SLC31A2O15432 143 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 TRGC1P0CF51 173 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 S100PP25815 95 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 VKORC1L1Q8N0U8 176 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 OR4S2Q8NH73 311 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 FRZBQ92765 325 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 HEYLQ9NQ87 328 aaPredicted RBP14.3□□□□□ -0.12
CLDN11-201ENST00000064724 TMEM140Q9NV12 185 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 GAR1Q9NY12 217 aaKnown RBP14.3□□□□□ -0.12
CLDN11-201ENST00000064724 DOCK11Q5JSL3 2073 aa14.3□□□□□ -0.12
CLDN11-201ENST00000064724 SPENQ96T58 3664 aaKnown RBP14.3□□□□□ -0.12
CLDN11-201ENST00000064724 ELOA3CA0A087WX78 387 aaPredicted RBP14.29□□□□□ -0.12
CLDN11-201ENST00000064724 TRGV8A0A0C4DH27 118 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 OPRK1P41145 380 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 CT45A1Q5HYN5 189 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 UTF1Q5T230 341 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 VHLLQ6RSH7 139 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 TREML4Q6UXN2 200 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 C16orf82Q7Z2V1 217 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 CT45A3Q8NHU0 189 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 SFXN3Q9BWM7 321 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 FAM234AQ9H0X4 552 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 MIOXQ9UGB7 285 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 TRAV3A0A0B4J244 114 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 VENTXO95231 258 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 IGHV3-7P01780 117 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 CEACAM8P31997 349 aaPredicted RBP14.29□□□□□ -0.12
CLDN11-201ENST00000064724 OR51G1Q8NGK1 321 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 TMEM170AQ8WVE7 144 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 GCM1Q9NP62 436 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 RNF7Q9UBF6 113 aa14.29□□□□□ -0.12
CLDN11-201ENST00000064724 EP300Q09472 2414 aaPredicted RBP14.29□□□□□ -0.12
CLDN11-201ENST00000064724 DSPP15924 2871 aaKnown RBP14.28□□□□□ -0.12
CLDN11-201ENST00000064724 PPP1R2P9O14990 202 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 DEFA4P12838 97 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 SELLP14151 372 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 FAM201AQ5SY85 155 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 STUMQ69YW2 141 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 OR10A7Q8NGE5 316 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 SRD5A3Q9H8P0 318 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 LINC00574Q9H8X3 128 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 IL19Q9UHD0 177 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 TCF19Q9Y242 345 aa14.28□□□□□ -0.12
CLDN11-201ENST00000064724 LINC00587B1AMM8 73 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms