RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ABLIM2Q6H8Q1 611 aa19.73■□□□□ 0.75
TARBP1-201ENST00000040877 CHODLQ9H9P2 273 aa19.73■□□□□ 0.75
TARBP1-201ENST00000040877 NPIPB11E5RHQ5 1161 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 C8orf88P0DMB2 117 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 CYB561D1Q8N8Q1 229 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 FLVCR1-AS1Q8TAF5 88 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 LINC01560Q8TB33 94 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 MYOZ3Q8TDC0 251 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 FAM27E3Q08E93 113 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 SGMS2Q8NHU3 365 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 PNKDQ8N490 385 aa19.72■□□□□ 0.75
TARBP1-201ENST00000040877 REPIN1Q9BWE0 567 aaKnown RBP19.72■□□□□ 0.75
TARBP1-201ENST00000040877 SIGLEC5O15389 551 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 TBX6O95947 436 aaPredicted RBP19.71■□□□□ 0.75
TARBP1-201ENST00000040877 ZNF660Q6AZW8 331 aaPredicted RBP19.71■□□□□ 0.75
TARBP1-201ENST00000040877 WDYHV1Q96HA8 205 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 TLNRD1Q9H1K6 362 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 MIC13Q5XKP0 118 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 OSR1Q8TAX0 266 aaPredicted RBP19.71■□□□□ 0.75
TARBP1-201ENST00000040877 ANKRD36A6QL64 1941 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 CACNA1IQ9P0X4 2223 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 IGHV2OR16-5A0A0B4J2B6 119 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 OTOFQ9HC10 1997 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 ATP5G2Q06055 141 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 C19orf48Q6RUI8 117 aa19.71■□□□□ 0.75
TARBP1-201ENST00000040877 RHBDL1O75783 438 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 MFAP2P55001 183 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 MARVELD3Q96A59 401 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 MRPL32Q9BYC8 188 aaKnown RBP19.7■□□□□ 0.74
TARBP1-201ENST00000040877 ZG16O60844 167 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 MEF2CQ06413 473 aaPredicted RBP19.7■□□□□ 0.74
TARBP1-201ENST00000040877 SYT8Q8NBV8 401 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 OR51G1Q8NGK1 321 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 RPS20P60866 119 aaKnown RBP19.7■□□□□ 0.74
TARBP1-201ENST00000040877 CFHR1Q03591 330 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 RELQ04864 619 aaPredicted RBP19.7■□□□□ 0.74
TARBP1-201ENST00000040877 ZNF738Q8NE65 137 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 TMSB15BA0A087X1C1 80 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 C9orf172C9J069 976 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 NDUFB4O95168 129 aa19.7■□□□□ 0.74
TARBP1-201ENST00000040877 PGPA6NDG6 321 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 AREGP15514 252 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 SSTR5P35346 364 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 OR52M1Q8NGK5 317 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 ELOVL1Q9BW60 279 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 HSPB7Q9UBY9 170 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 NTN3O00634 580 aaPredicted RBP19.69■□□□□ 0.74
TARBP1-201ENST00000040877 RNFT1Q5M7Z0 435 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 A0A0G2JMZ2 1700 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 LRRC37A2A6NM11 1700 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 SPTBP11277 2137 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 A0A0G2JMM0 328 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 A0A1W2PPB8 328 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 A0A1W2PRS3 328 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 KIR3DP1A8MWS1 328 aa19.69■□□□□ 0.74
TARBP1-201ENST00000040877 IBA57Q5T440 356 aaKnown RBP19.68■□□□□ 0.74
TARBP1-201ENST00000040877 RTN4RL2Q86UN3 420 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 EEF1AKMT3Q96AZ1 226 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 TRPM7Q96QT4 1865 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 IGKV1D-43A0A0B4J1Z2 117 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 IQCF6A8MYZ5 107 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 MAS1LP35410 378 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 ZNRF1Q8ND25 227 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 PLSCR2Q9NRY7 297 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 LTBP1Q14766 1721 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 LHX2P50458 406 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 RND3P61587 244 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 FXYD3Q14802 87 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 SCGB1D4Q6XE38 83 aa19.68■□□□□ 0.74
TARBP1-201ENST00000040877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.67■□□□□ 0.74
TARBP1-201ENST00000040877 IGHV1-2P23083 117 aa19.67■□□□□ 0.74
TARBP1-201ENST00000040877 LCTP09848 1927 aa19.67■□□□□ 0.74
TARBP1-201ENST00000040877 FCGR2BP31994 310 aaPredicted RBP19.67■□□□□ 0.74
TARBP1-201ENST00000040877 PET117Q6UWS5 81 aa19.67■□□□□ 0.74
TARBP1-201ENST00000040877 GATAD1Q8WUU5 269 aa19.67■□□□□ 0.74
TARBP1-201ENST00000040877 OR51M1Q9H341 326 aa19.67■□□□□ 0.74
TARBP1-201ENST00000040877 DPM3Q9P2X0 92 aa19.67■□□□□ 0.74
TARBP1-201ENST00000040877 LEAP2Q969E1 77 aa19.67■□□□□ 0.74
TARBP1-201ENST00000040877 PSMG3Q9BT73 122 aaPredicted RBP19.67■□□□□ 0.74
TARBP1-201ENST00000040877 MRPL13Q9BYD1 178 aaKnown RBP19.67■□□□□ 0.74
TARBP1-201ENST00000040877 C12orf77C9JDV5 145 aa19.66■□□□□ 0.74
TARBP1-201ENST00000040877 KCNAB3O43448 404 aa19.66■□□□□ 0.74
TARBP1-201ENST00000040877 ZNF137PP52743 207 aa19.66■□□□□ 0.74
TARBP1-201ENST00000040877 OR11H4Q8NGC9 324 aa19.66■□□□□ 0.74
TARBP1-201ENST00000040877 MTCL1Q9Y4B5 1905 aaKnown RBP19.66■□□□□ 0.74
TARBP1-201ENST00000040877 BSPH1Q075Z2 132 aa19.66■□□□□ 0.74
TARBP1-201ENST00000040877 KLF7O75840 302 aaPredicted RBP19.65■□□□□ 0.74
TARBP1-201ENST00000040877 AURKAIP1Q9NWT8 199 aaPredicted RBP19.65■□□□□ 0.74
TARBP1-201ENST00000040877 PSG7Q13046 419 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 GDF9O60383 454 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 H2BFSP57053 126 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 DDB2Q92466 427 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 RNASE6Q93091 150 aaKnown RBP19.65■□□□□ 0.74
TARBP1-201ENST00000040877 SPSB4Q96A44 273 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 PAM16Q9Y3D7 125 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 GALNT14Q96FL9 552 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 ABCA7Q8IZY2 2146 aa19.65■□□□□ 0.74
TARBP1-201ENST00000040877 RPL24P83731 157 aaKnown RBP19.64■□□□□ 0.74
TARBP1-201ENST00000040877 GGACTQ9BVM4 153 aa19.64■□□□□ 0.74
TARBP1-201ENST00000040877 CD8AP01732 235 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms