RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Tex37Q9DAG4 180 aa13.65□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Mmp17Q9R0S3 578 aa13.65□□□□□ -0.22
Ccdc88b-201ENSMUST00000113440 Gm5225J3QPL3 108 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fgf2P15655 154 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tas2r41P59532 308 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Shc1P98083 579 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1465Q7TQR2 307 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Sf3b5Q923D4 86 aaKnown RBP13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tmem33Q9CR67 247 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 ManbalQ9D8X0 85 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tnfrsf19Q9JLL3 416 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm45861A0A1B0GRY3 1923 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1438-ps1A0A140LHS9 319 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm4175D3YTW8 314 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Vmn1r114L7N226 321 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Vmn1r126L7N2C8 321 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gpr12P35412 334 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Nkpd1Q0VF94 599 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Klk1b21Q61759 261 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Paqr8Q80ZE5 354 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Neil3Q8K203 606 aaKnown RBP13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tstd3Q9D0B5 157 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Nudt3Q9JI46 168 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Scgb1b12A0A087WP21 93 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm9602J3QPD5 205 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mst1P26928 716 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm7534Q3UU21 679 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Sys1Q78S06 156 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1371Q7TQT7 311 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Cdc34Q8CFI2 235 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tmem144Q8VEH0 348 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Q9DAS2 200 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rhox7aA2A4F1 281 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Mn1D3YWE6 1297 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 P01822 137 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr141Q60880 325 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tas2r114Q7M722 309 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rspo4Q8BJ73 228 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr346Q8VGJ7 309 aa13.64□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rps4xP62702 263 aaKnown RBP13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 CiartQ3TQ03 375 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 VwceQ3U515 929 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Q3U595 105 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Trib1Q8K4K4 372 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr282A1L1B4 308 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm16519F8VQK7 162 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gng3P63216 75 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Adgrg5Q3V3Z3 524 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1427Q8VFU9 311 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rdh9Q8K5C8 317 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Nmnat3Q99JR6 245 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Npffr1E9Q468 432 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fut9O88819 359 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 IghgP01863 330 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr324Q5NCC7 333 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ewsr1Q61545 655 aaKnown RBP13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Vmn1r73Q8R293 303 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1102Q8VES2 324 aa13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tppp3Q9CRB6 176 aaKnown RBP13.63□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm38303A0A0A6YWW8 100 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm14597A2CFG5 200 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Hist1h1dP43277 221 aaKnown RBP13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ppp1cbP62141 327 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rbp4Q00724 201 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Foxl1Q64731 336 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 GcsamQ6RFH4 181 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Igsf21Q7TNR6 468 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Nmes1Q810Q5 83 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 TsfmQ9CZR8 324 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr432E9Q8M2 312 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Wisp1O54775 367 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 H2-DMaP28078 261 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Tex52Q3TTI8 308 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Rnf24Q8BGI1 148 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Stpg2Q8C8J0 561 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Dusp18Q8VE01 188 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Pard6aQ9Z101 346 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Kif26bQ7TNC6 2112 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Pom121l12A0A1B0GSJ4 278 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 SdcbpO08992 299 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gpr33O88416 339 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Smim7Q5RKS2 75 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr980Q8VH08 310 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Abhd12Q99LR1 398 aaKnown RBP13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 1700029F12RikQ9CRB4 147 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr896-ps1A0A1L1SRZ8 308 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm20939L7N243 523 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gfi1bO70237 330 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fpr2O88536 351 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 MscO88940 201 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Cxcl10P17515 98 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Cited1P97769 203 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Adprhl1Q8BGK2 353 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 StradbQ8K4T3 418 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr494Q8VG07 314 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Cxcr6Q9EQ16 351 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Fscn3Q9QXW4 498 aa13.62□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Ighv1-54A0A075B5W5 117 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Gm14325A2AW67 498 aa13.61□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Spink14B9EJP9 96 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 85 ms