RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ZC3H12CQ9C0D7 883 aaKnown RBP20.89■□□□□ 0.93
PHGDH-234ENST00000642041 MYOZ2Q9NPC6 264 aa20.89■□□□□ 0.93
PHGDH-234ENST00000642041 GPR108Q9NPR9 543 aa20.89■□□□□ 0.93
PHGDH-234ENST00000642041 COL6A3P12111 3177 aa20.89■□□□□ 0.93
PHGDH-234ENST00000642041 PRAMEF18Q5VWM3 479 aa20.88■□□□□ 0.93
PHGDH-234ENST00000642041 CELF1Q92879 486 aaKnown RBP20.88■□□□□ 0.93
PHGDH-234ENST00000642041 KAZALD1Q96I82 304 aa20.88■□□□□ 0.93
PHGDH-234ENST00000642041 TBC1D32Q96NH3 1257 aa20.88■□□□□ 0.93
PHGDH-234ENST00000642041 TMEM106CQ9BVX2 250 aa20.88■□□□□ 0.93
PHGDH-234ENST00000642041 SCAF8Q9UPN6 1271 aaKnown RBP20.88■□□□□ 0.93
PHGDH-234ENST00000642041 H0YGN5 161 aa20.87■□□□□ 0.93
PHGDH-234ENST00000642041 HIP1O00291 1037 aa20.87■□□□□ 0.93
PHGDH-234ENST00000642041 CIAO1O76071 339 aa20.87■□□□□ 0.93
PHGDH-234ENST00000642041 NF2P35240 595 aa20.87■□□□□ 0.93
PHGDH-234ENST00000642041 PTPN12Q05209 780 aaKnown RBP20.87■□□□□ 0.93
PHGDH-234ENST00000642041 ERO1AQ96HE7 468 aa20.87■□□□□ 0.93
PHGDH-234ENST00000642041 GMLQ99445 158 aa20.87■□□□□ 0.93
PHGDH-234ENST00000642041 APBB1O00213 710 aa20.86■□□□□ 0.93
PHGDH-234ENST00000642041 USP17L8P0C7I0 530 aa20.86■□□□□ 0.93
PHGDH-234ENST00000642041 IL15P40933 162 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-234ENST00000642041 INHBEP58166 350 aa20.86■□□□□ 0.93
PHGDH-234ENST00000642041 SPRYD7Q5W111 196 aa20.86■□□□□ 0.93
PHGDH-234ENST00000642041 G3V3G9 751 aa20.85■□□□□ 0.93
PHGDH-234ENST00000642041 SMARCA5O60264 1052 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-234ENST00000642041 SF3B3Q15393 1217 aaKnown RBP20.85■□□□□ 0.93
PHGDH-234ENST00000642041 CCDC57Q2TAC2 916 aa20.85■□□□□ 0.93
PHGDH-234ENST00000642041 DCAF8Q5TAQ9 597 aa20.85■□□□□ 0.93
PHGDH-234ENST00000642041 ERICH6Q7L0X2 663 aa20.85■□□□□ 0.93
PHGDH-234ENST00000642041 ARMC9Q7Z3E5 817 aa20.85■□□□□ 0.93
PHGDH-234ENST00000642041 C22orf23Q9BZE7 217 aa20.85■□□□□ 0.93
PHGDH-234ENST00000642041 ECHDC1Q9NTX5 307 aa20.85■□□□□ 0.93
PHGDH-234ENST00000642041 RBM25P49756 843 aaKnown RBP20.84■□□□□ 0.93
PHGDH-234ENST00000642041 LMBR1LQ6UX01 489 aa20.84■□□□□ 0.93
PHGDH-234ENST00000642041 IFNL1Q8IU54 200 aa20.84■□□□□ 0.93
PHGDH-234ENST00000642041 FAM89AQ96GI7 184 aa20.84■□□□□ 0.93
PHGDH-234ENST00000642041 MANSC4A6NHS7 340 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-234ENST00000642041 IRS4O14654 1257 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-234ENST00000642041 SDSP20132 328 aa20.83■□□□□ 0.93
PHGDH-234ENST00000642041 FOXO4P98177 505 aa20.83■□□□□ 0.93
PHGDH-234ENST00000642041 TBC1D9Q6ZT07 1266 aa20.83■□□□□ 0.93
PHGDH-234ENST00000642041 RUFY2Q8WXA3 655 aa20.83■□□□□ 0.93
PHGDH-234ENST00000642041 EFCC1Q9HA90 598 aa20.83■□□□□ 0.93
PHGDH-234ENST00000642041 PODXL2Q9NZ53 605 aa20.83■□□□□ 0.93
PHGDH-234ENST00000642041 AKAP2Q9Y2D5 859 aa20.83■□□□□ 0.93
PHGDH-234ENST00000642041 PDE8AO60658 829 aa20.82■□□□□ 0.92
PHGDH-234ENST00000642041 CSF1RP07333 972 aa20.82■□□□□ 0.92
PHGDH-234ENST00000642041 GSPT1P15170 499 aaKnown RBP20.82■□□□□ 0.92
PHGDH-234ENST00000642041 RTL5Q5HYW3 569 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-234ENST00000642041 LDLRAD1Q5T700 205 aa20.82■□□□□ 0.92
PHGDH-234ENST00000642041 CHRDL2Q6WN34 429 aa20.82■□□□□ 0.92
PHGDH-234ENST00000642041 CD99L2Q8TCZ2 262 aa20.82■□□□□ 0.92
PHGDH-234ENST00000642041 ZNF333Q96JL9 665 aa20.82■□□□□ 0.92
PHGDH-234ENST00000642041 RFX5P48382 616 aaPredicted RBP20.81■□□□□ 0.92
PHGDH-234ENST00000642041 NBPF9Q3BBW0 867 aa20.81■□□□□ 0.92
PHGDH-234ENST00000642041 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
PHGDH-234ENST00000642041 PSME4Q14997 1843 aa20.81■□□□□ 0.92
PHGDH-234ENST00000642041 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
PHGDH-234ENST00000642041 IFIT5Q13325 482 aaKnown RBP20.8■□□□□ 0.92
PHGDH-234ENST00000642041 EVI5LQ96CN4 794 aa20.8■□□□□ 0.92
PHGDH-234ENST00000642041 IL1RAPL2Q9NP60 686 aa20.8■□□□□ 0.92
PHGDH-234ENST00000642041 RBM27Q9P2N5 1060 aaKnown RBP20.8■□□□□ 0.92
PHGDH-234ENST00000642041 MYH3P11055 1940 aa20.79■□□□□ 0.92
PHGDH-234ENST00000642041 TRIM6-TRIM34B2RNG4 842 aa20.79■□□□□ 0.92
PHGDH-234ENST00000642041 EYA2O00167 538 aa20.79■□□□□ 0.92
PHGDH-234ENST00000642041 UFL1O94874 794 aa20.79■□□□□ 0.92
PHGDH-234ENST00000642041 MCCP23508 829 aa20.79■□□□□ 0.92
PHGDH-234ENST00000642041 MFAP1P55081 439 aaKnown RBP20.79■□□□□ 0.92
PHGDH-234ENST00000642041 CTSWP56202 376 aa20.79■□□□□ 0.92
PHGDH-234ENST00000642041 USP17L3A6NCW0 530 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 USP17L4A6NCW7 530 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 IGF2BP3O00425 579 aaKnown RBP eCLIP20.78■□□□□ 0.92
PHGDH-234ENST00000642041 LRRFIP1Q32MZ4 808 aaKnown RBP20.78■□□□□ 0.92
PHGDH-234ENST00000642041 TAF7LQ5H9L4 462 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 EPHA10Q5JZY3 1008 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 USP17L1Q7RTZ2 530 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 NBPF11Q86T75 865 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 AACSQ86V21 672 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 GGA1Q9UJY5 639 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 CHMP3Q9Y3E7 222 aa20.78■□□□□ 0.92
PHGDH-234ENST00000642041 COL4A1P02462 1669 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 ANKRD18BA2A2Z9 1011 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 SASH1O94885 1247 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 ZBTB48P10074 688 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-234ENST00000642041 PRKG1Q13976 671 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 SLC4A8Q2Y0W8 1093 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 SLC10A4Q96EP9 437 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 ANKIB1Q9P2G1 1089 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
PHGDH-234ENST00000642041 WNT10BO00744 389 aa20.76■□□□□ 0.91
PHGDH-234ENST00000642041 MNX1P50219 401 aaPredicted RBP20.76■□□□□ 0.91
PHGDH-234ENST00000642041 SP3Q02447 781 aa20.76■□□□□ 0.91
PHGDH-234ENST00000642041 CCDC152Q4G0S7 254 aa20.76■□□□□ 0.91
PHGDH-234ENST00000642041 ANGEL1Q9UNK9 670 aaKnown RBP20.76■□□□□ 0.91
PHGDH-234ENST00000642041 CRHR2Q13324 411 aa20.75■□□□□ 0.91
PHGDH-234ENST00000642041 OTUD7BQ6GQQ9 843 aa20.75■□□□□ 0.91
PHGDH-234ENST00000642041 PODNQ7Z5L7 613 aa20.75■□□□□ 0.91
PHGDH-234ENST00000642041 PI4K2BQ8TCG2 481 aa20.75■□□□□ 0.91
PHGDH-234ENST00000642041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.75■□□□□ 0.91
PHGDH-234ENST00000642041 PA2G4Q9UQ80 394 aaKnown RBP20.75■□□□□ 0.91
PHGDH-234ENST00000642041 RFX7Q2KHR2 1363 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms