RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 PSMD14O00487 310 aa15.63■□□□□ 0.09
PHGDH-218ENST00000641491 ZBTB22O15209 634 aa15.63■□□□□ 0.09
PHGDH-218ENST00000641491 CDC45O75419 566 aa15.63■□□□□ 0.09
PHGDH-218ENST00000641491 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
PHGDH-218ENST00000641491 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
PHGDH-218ENST00000641491 RPS12P25398 132 aaKnown RBP15.63■□□□□ 0.09
PHGDH-218ENST00000641491 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
PHGDH-218ENST00000641491 FKBP1AP62942 108 aaKnown RBP15.63■□□□□ 0.09
PHGDH-218ENST00000641491 NAA16Q6N069 864 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-218ENST00000641491 RSBN1LQ6PCB5 846 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-218ENST00000641491 CYP2E1P05181 493 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-218ENST00000641491 SDSP20132 328 aa15.62■□□□□ 0.09
PHGDH-218ENST00000641491 SLC9C2Q5TAH2 1124 aa15.62■□□□□ 0.09
PHGDH-218ENST00000641491 TBC1D9Q6ZT07 1266 aa15.62■□□□□ 0.09
PHGDH-218ENST00000641491 TICAM2Q86XR7 235 aa15.62■□□□□ 0.09
PHGDH-218ENST00000641491 AGBL3Q8NEM8 1001 aa15.62■□□□□ 0.09
PHGDH-218ENST00000641491 TTF2Q9UNY4 1162 aaKnown RBP15.62■□□□□ 0.09
PHGDH-218ENST00000641491 FER1L6Q2WGJ9 1857 aa15.62■□□□□ 0.09
PHGDH-218ENST00000641491 RFX7Q2KHR2 1363 aa15.62■□□□□ 0.09
PHGDH-218ENST00000641491 FZD9O00144 591 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 BAG3O95817 575 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
PHGDH-218ENST00000641491 MMP14P50281 582 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 CERS3Q8IU89 383 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 KIAA0825Q8IV33 1275 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 GPC2Q8N158 579 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 MAGEB6Q8N7X4 407 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 TEKT1Q969V4 418 aa15.61■□□□□ 0.09
PHGDH-218ENST00000641491 YDJCA8MPS7 323 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 H7C1D1 291 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 RNF113AO15541 343 aaKnown RBP15.6■□□□□ 0.09
PHGDH-218ENST00000641491 CYP7A1P22680 504 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 CXCL9Q07325 125 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 DACT2Q5SW24 774 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 EDC3Q96F86 508 aaKnown RBP15.6■□□□□ 0.09
PHGDH-218ENST00000641491 DDRGK1Q96HY6 314 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 ANTXR1Q9H6X2 564 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
PHGDH-218ENST00000641491 TMOD2Q9NZR1 351 aa15.6■□□□□ 0.09
PHGDH-218ENST00000641491 MYO1BO43795 1136 aa15.59■□□□□ 0.09
PHGDH-218ENST00000641491 VIL1P09327 827 aaKnown RBP15.59■□□□□ 0.09
PHGDH-218ENST00000641491 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
PHGDH-218ENST00000641491 PRDX5P30044 214 aa15.59■□□□□ 0.09
PHGDH-218ENST00000641491 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
PHGDH-218ENST00000641491 COL1A1P02452 1464 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-218ENST00000641491 PDE6AP16499 860 aa15.58■□□□□ 0.08
PHGDH-218ENST00000641491 PLCG2P16885 1265 aa15.58■□□□□ 0.08
PHGDH-218ENST00000641491 MECOMQ03112 1051 aa15.58■□□□□ 0.08
PHGDH-218ENST00000641491 UPF2Q9HAU5 1272 aaKnown RBP15.58■□□□□ 0.08
PHGDH-218ENST00000641491 ZNF541Q9H0D2 1346 aa15.58■□□□□ 0.08
PHGDH-218ENST00000641491 IQCA1LA6NCM1 817 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 GMPSP49915 693 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-218ENST00000641491 SCNN1DP51172 638 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 UBE3CQ15386 1083 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 DLGAP5Q15398 846 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 CWC27Q6UX04 472 aaKnown RBP15.57■□□□□ 0.08
PHGDH-218ENST00000641491 APPBP2Q92624 585 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 MXD3Q9BW11 206 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 KCNQ5Q9NR82 932 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-218ENST00000641491 ZNF532Q9HCE3 1301 aa15.57■□□□□ 0.08
PHGDH-218ENST00000641491 MYH13Q9UKX3 1938 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 MAGEB6P1A0A0J9YX57 407 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 SLC34A2O95436 690 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 ADD2P35612 726 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 AMOTL1Q8IY63 956 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 DPF2Q92785 391 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 NSUN4Q96CB9 384 aaKnown RBP15.56■□□□□ 0.08
PHGDH-218ENST00000641491 HELLSQ9NRZ9 838 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 SERPINA10Q9UK55 444 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 MROH7-TTC4A0A0A0MT08 1334 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 RAD50Q92878 1312 aa15.56■□□□□ 0.08
PHGDH-218ENST00000641491 VEGFAP15692 232 aaPredicted RBP15.55■□□□□ 0.08
PHGDH-218ENST00000641491 CRKP46108 304 aa15.55■□□□□ 0.08
PHGDH-218ENST00000641491 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
PHGDH-218ENST00000641491 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
PHGDH-218ENST00000641491 MICALL2Q8IY33 904 aa15.55■□□□□ 0.08
PHGDH-218ENST00000641491 CRNKL1Q9BZJ0 848 aaKnown RBP15.55■□□□□ 0.08
PHGDH-218ENST00000641491 NACAP1Q9BZK3 213 aa15.55■□□□□ 0.08
PHGDH-218ENST00000641491 GLTPD2A6NH11 291 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 REC8O95072 547 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 APPP05067 770 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 GNAT2P19087 354 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 BTDP43251 543 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 NMIQ13287 307 aaPredicted RBP15.54■□□□□ 0.08
PHGDH-218ENST00000641491 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 CFAP100Q494V2 611 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 HHIPL2Q6UWX4 724 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 CERS5Q8N5B7 392 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 MIGA1Q8NAN2 632 aa15.54■□□□□ 0.08
PHGDH-218ENST00000641491 AATFQ9NY61 560 aaKnown RBP eCLIP15.54■□□□□ 0.08
PHGDH-218ENST00000641491 CNOT7Q9UIV1 285 aaKnown RBP15.54■□□□□ 0.08
PHGDH-218ENST00000641491 SBF1O95248 1867 aa15.53■□□□□ 0.08
PHGDH-218ENST00000641491 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-218ENST00000641491 CHMLP26374 656 aa15.53■□□□□ 0.08
PHGDH-218ENST00000641491 USP5P45974 858 aa15.53■□□□□ 0.08
PHGDH-218ENST00000641491 RBM26Q5T8P6 1007 aaKnown RBP15.53■□□□□ 0.08
PHGDH-218ENST00000641491 MYOZ2Q9NPC6 264 aa15.53■□□□□ 0.08
PHGDH-218ENST00000641491 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms