RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 RXRAP19793 462 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 ADALQ6DHV7 355 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 HELBQ8NG08 1087 aaPredicted RBP9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 ANKIB1Q9P2G1 1089 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 CTDP1Q9Y5B0 961 aaPredicted RBP9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.83□□□□□ -0.842e-13■■□□□ 13.2
HNRNPU-219ENST00000639628 B4E1Z4 1266 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 LDHCP07864 332 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 PUM3Q15397 648 aaKnown RBP9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 CCDC102AQ96A19 550 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 MAGEB6P1A0A0J9YX57 407 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 SASH1O94885 1247 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 ZNF202O95125 648 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 MBD4O95243 580 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 FGFR1OPO95684 399 aaKnown RBP9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 AFMP43652 599 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 TCIRG1Q13488 830 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 MAP9Q49MG5 647 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
HNRNPU-219ENST00000639628 NCOA3Q9Y6Q9 1424 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 PDE8AO60658 829 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 BAG3O95817 575 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 SSBP05455 408 aaKnown RBP eCLIP9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 CCDC178Q5BJE1 867 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 OTUD7BQ6GQQ9 843 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 NIP7Q9Y221 180 aaKnown RBP eCLIP9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ADGRB2O60241 1585 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ZAP70P43403 619 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 AMPD3Q01432 767 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 TMEM266Q2M3C6 531 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 HSP90AA4PQ58FG1 418 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 USP28Q96RU2 1077 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 MYO6Q9UM54 1294 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 CPS1P31327 1500 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ERICH4A6NGS2 130 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 CUTAO60888 179 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 LARGE1O95461 756 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 CYP21A2P08686 494 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 NLRP12P59046 1061 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 MYSM1Q5VVJ2 828 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ZNF589Q86UQ0 364 aaPredicted RBP9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ERO1AQ96HE7 468 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ZHX3Q9H4I2 956 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 IQSEC3Q9UPP2 1182 aaPredicted RBP9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 ERBB3P21860 1342 aa9.82□□□□□ -0.84
HNRNPU-219ENST00000639628 PRAMEF22A3QJZ6 481 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 DEXIO95424 95 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 GNAQP50148 359 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 RRAGBQ5VZM2 374 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 FAM114A1Q8IWE2 563 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 DHX58Q96C10 678 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 KCNH3Q9ULD8 1083 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 ARHGEF28Q8N1W1 1705 aaKnown RBP9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 CCDC175P0C221 793 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 KRT2P35908 639 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 SYT10Q6XYQ8 523 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 SLF2Q8IX21 1173 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 SH3TC1Q8TE82 1336 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 ADAMTS2O95450 1211 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 DDIT3P35638 169 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 SCRN1Q12765 414 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 KRT40Q6A162 431 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 LPIN2Q92539 896 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 TSG101Q99816 390 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 TMX1Q9H3N1 280 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 MRVI1Q9Y6F6 885 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 NRKQ7Z2Y5 1582 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 AGLP35573 1532 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 PREX1Q8TCU6 1659 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 USO1O60763 962 aaKnown RBP9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 CALML3P27482 149 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 ZMYM1Q5SVZ6 1142 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 MIGA1Q8NAN2 632 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 MRFAP1L1Q96HT8 127 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 PDLIM2Q96JY6 352 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 TTC14Q96N46 770 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 CRACR2AQ9BSW2 395 aa9.81□□□□□ -0.84
HNRNPU-219ENST00000639628 CLTCQ00610 1675 aaKnown RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 CIAO1O76071 339 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 MTIF2P46199 727 aaKnown RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 FANCCQ00597 558 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 TTLL7Q6ZT98 887 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 TDRD7Q8NHU6 1098 aaKnown RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 CALML4Q96GE6 196 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 OGFRQ9NZT2 677 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 KIAA1468Q9P260 1216 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 V9GYY5 206 aaPredicted RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 MROH1Q8NDA8 1641 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 PTPRUQ92729 1446 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 PTPN12Q05209 780 aaKnown RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 PDE4CQ08493 712 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 PARP10Q53GL7 1025 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 EHBP1Q8NDI1 1231 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 GTPBP4Q9BZE4 634 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms