RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 TTC19Q6DKK2 380 aaPredicted RBP12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 IGSF22Q8N9C0 903 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 STAT6P42226 847 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 IFT88Q13099 833 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 SATB2Q9UPW6 733 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 ARHGAP6O43182 974 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 TERF2Q15554 542 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 CLUL1Q15846 466 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 UAP1Q16222 522 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 NAA16Q6N069 864 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 FGD6Q6ZV73 1430 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 IFIT3O14879 490 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 CEP126Q9P2H0 1117 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 FANCCQ00597 558 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 DYNC1I2Q13409 638 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 SEL1L2Q5TEA6 688 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 DNAI2Q9GZS0 605 aa12.22□□□□□ -0.45
KCNMA1-259ENST00000639406 ARL1P40616 181 aaPredicted RBP12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 RNASE9P60153 205 aaKnown RBP12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 SLC26A6Q9BXS9 759 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 YIPF3Q9GZM5 350 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 SAMM50Q9Y512 469 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 GJC1P36383 396 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 TRIM14Q14142 442 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 ANKRD20A3Q5VUR7 823 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 SECISBP2LQ93073 1101 aaKnown RBP12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 MGARPQ8TDB4 240 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 SYNCQ9H7C4 482 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 BCAP29Q9UHQ4 241 aa12.21□□□□□ -0.45
KCNMA1-259ENST00000639406 PHEXP78562 749 aa12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 KRT71Q3SY84 523 aa12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 EXOC4Q96A65 974 aa12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 DHX58Q96C10 678 aa12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 ERBINQ96RT1 1412 aa12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 ESYT1Q9BSJ8 1104 aa12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 CLSTN2Q9H4D0 955 aa12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 TTF1Q15361 905 aaPredicted RBP12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.46
KCNMA1-259ENST00000639406 GUCY2CP25092 1073 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 PLCB3Q01970 1234 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 MCM7P33993 719 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 IRX1P78414 480 aaPredicted RBP12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 BRF1Q92994 677 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 LMBRD1Q9NUN5 540 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 TSHZ3Q63HK5 1081 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 NAPBQ9H115 298 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 ATAD2Q6PL18 1390 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 TCP11Q8WWU5 503 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 BICC1Q9H694 974 aaKnown RBP12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 ATP6V0A2Q9Y487 856 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 SYNJ2O15056 1496 aa12.2□□□□□ -0.46
KCNMA1-259ENST00000639406 ARHGAP42A6NI28 874 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 MX2P20592 715 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 STXBP4Q6ZWJ1 553 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 KLHL7Q8IXQ5 586 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 RPGRIP1Q96KN7 1286 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 SCINQ9Y6U3 715 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 EEF2P13639 858 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 TRIM31Q9BZY9 425 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 MINDY4BA8MYZ0 360 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 BMP15O95972 392 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 STX2P32856 288 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 RAD51AP2Q09MP3 1159 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 TNIP1Q15025 636 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 ANKRD42Q8N9B4 389 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 TXNDC16Q9P2K2 825 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 LRP2BPQ9P2M1 347 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 SLC4A8Q2Y0W8 1093 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 I3L4J1 428 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 IFIT1P09914 478 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 SATB1Q01826 763 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 SYCP3Q8IZU3 236 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 ACTR5Q9H9F9 607 aaPredicted RBP12.19□□□□□ -0.46
KCNMA1-259ENST00000639406 PABPN1LA6NDY0 278 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 PPP1R21Q6ZMI0 780 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 FBXO18Q8NFZ0 1043 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 CENPKQ9BS16 269 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 ATICP31939 592 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 GUCY2FP51841 1108 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms