RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 PRDM10Q9NQV6 1147 aa3.38□□□□□ -1.87
HMHB1-202ENST00000638299 ENAMQ9NRM1 1142 aa3.38□□□□□ -1.87
HMHB1-202ENST00000638299 PPP4R2Q9NY27 417 aa3.38□□□□□ -1.87
HMHB1-202ENST00000638299 ZIM2Q9NZV7 527 aa3.38□□□□□ -1.87
HMHB1-202ENST00000638299 FNDC3AQ9Y2H6 1198 aaKnown RBP3.38□□□□□ -1.87
HMHB1-202ENST00000638299 RPS6KL1Q9Y6S9 549 aa3.38□□□□□ -1.87
HMHB1-202ENST00000638299 A0A1W2PQH9 124 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 FAM221AA4D161 298 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 METTL12A8MUP2 240 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 ALG1L2C9J202 215 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 ADCY3O60266 1144 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 XYLBO75191 536 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 RAPGEF3O95398 923 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 EYA4O95677 639 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 ADH1CP00326 375 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 MYL1P05976 194 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 RLBP1P12271 317 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 SDSP20132 328 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 PTGIRP43119 386 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 ZNF157P51786 506 aaPredicted RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 CASP7P55210 303 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 FAAP100Q0VG06 881 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 MTMR1Q13613 665 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 SAFB2Q14151 953 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 SPRED3Q2MJR0 410 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 CT47A1Q5JQC4 288 aaPredicted RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 AKAP4Q5JQC9 854 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 PERM1Q5SV97 790 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 RC3H1Q5TC82 1133 aaKnown RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 TTC39BQ5VTQ0 682 aaPredicted RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 CNNM4Q6P4Q7 775 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 SLC4A10Q6U841 1118 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 LRRC69Q6ZNQ3 347 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 BTLAQ7Z6A9 289 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 CHPFQ8IZ52 775 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 TMTC2Q8N394 836 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 AFAP1L2Q8N4X5 818 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 RHBDD1Q8TEB9 315 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 RELTQ969Z4 430 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 ZNF512BQ96KM6 892 aaPredicted RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 STAC3Q96MF2 364 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 CNTNAP3BQ96NU0 1288 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 TARS2Q9BW92 718 aaKnown RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 CNTNAP3Q9BZ76 1288 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 TRIM8Q9BZR9 551 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 IL21Q9HBE4 155 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 BSDC1Q9NW68 430 aaPredicted RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 ABI2Q9NYB9 513 aaPredicted RBP3.37□□□□□ -1.87
HMHB1-202ENST00000638299 PPM1HQ9ULR3 514 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 ZNRF3Q9ULT6 936 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 TRAK1Q9UPV9 953 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 PLAAQ9Y263 795 aa3.37□□□□□ -1.87
HMHB1-202ENST00000638299 FAM83GA6ND36 823 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 IFRD1O00458 451 aaPredicted RBP3.36□□□□□ -1.87
HMHB1-202ENST00000638299 MAFGO15525 162 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 PLIN1O60240 522 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 KIF4AO95239 1232 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 PMLP29590 882 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 CDC27P30260 824 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 GRIA4P48058 902 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 ZNF165P49910 485 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 NEK2P51955 445 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 RELBQ01201 579 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 TMEM67Q5HYA8 995 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 COL13A1Q5TAT6 717 aaPredicted RBP3.36□□□□□ -1.87
HMHB1-202ENST00000638299 IER5Q5VY09 327 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.36□□□□□ -1.87
HMHB1-202ENST00000638299 MAMSTRQ6ZN01 415 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 TTC6Q86TZ1 520 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 TRIM42Q8IWZ5 723 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 FAM9BQ8IZU0 186 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 SAMD3Q8N6K7 520 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 ZSWIM2Q8NEG5 633 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 PNISRQ8TF01 805 aaKnown RBP3.36□□□□□ -1.87
HMHB1-202ENST00000638299 GATAD2BQ8WXI9 593 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 EXOC2Q96KP1 924 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 NLRP3Q96P20 1036 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 NECAB3Q96P71 396 aaPredicted RBP3.36□□□□□ -1.87
HMHB1-202ENST00000638299 HHIPQ96QV1 700 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 SPATA9Q9BWV2 254 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 LRRC3Q9BY71 257 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 PPCSQ9HAB8 311 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 AVENQ9NQS1 362 aaPredicted RBP3.36□□□□□ -1.87
HMHB1-202ENST00000638299 SEC31BQ9NQW1 1179 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 PGPEP1Q9NXJ5 209 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 MCM8Q9UJA3 840 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 INTUQ9ULD6 942 aa3.36□□□□□ -1.87
HMHB1-202ENST00000638299 GRIN3BO60391 1043 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 CILPO75339 1184 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 SASH3O75995 380 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 FGAP02671 866 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 SOX5P35711 763 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 EMP3P54852 163 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 PTPN11Q06124 597 aaPredicted RBP3.35□□□□□ -1.87
HMHB1-202ENST00000638299 NR5A1Q13285 461 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 HDAC1Q13547 482 aaPredicted RBP3.35□□□□□ -1.87
HMHB1-202ENST00000638299 MPP2Q14168 576 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 MLC1Q15049 377 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 BRD3Q15059 726 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 ZYXQ15942 572 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms