RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 RNF43Q68DV7 783 aa5.64□□□□□ -1.51
CHD2-228ENST00000637613 PI16Q6UXB8 463 aa5.64□□□□□ -1.51
CHD2-228ENST00000637613 ERMP1Q7Z2K6 904 aa5.64□□□□□ -1.51
CHD2-228ENST00000637613 HSH2DQ96JZ2 352 aa5.64□□□□□ -1.51
CHD2-228ENST00000637613 DNAJC2Q99543 621 aaKnown RBP5.64□□□□□ -1.51
CHD2-228ENST00000637613 SRCIN1Q9C0H9 1055 aa5.64□□□□□ -1.51
CHD2-228ENST00000637613 KCNMB2Q9Y691 235 aa5.64□□□□□ -1.51
CHD2-228ENST00000637613 FGRP09769 529 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 CPB1P15086 417 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 GRNP28799 593 aaKnown RBP5.63□□□□□ -1.51
CHD2-228ENST00000637613 IDH3AP50213 366 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 TAF1CQ15572 869 aaPredicted RBP5.63□□□□□ -1.51
CHD2-228ENST00000637613 TRIP4Q15650 581 aaPredicted RBP5.63□□□□□ -1.51
CHD2-228ENST00000637613 PERM1Q5SV97 790 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 HS2ST1Q7LGA3 356 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 USP48Q86UV5 1035 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 ZNF280CQ8ND82 737 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 EPS8L3Q8TE67 593 aaKnown RBP5.63□□□□□ -1.51
CHD2-228ENST00000637613 SNX29Q8TEQ0 813 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 UBL7Q96S82 380 aaPredicted RBP5.63□□□□□ -1.51
CHD2-228ENST00000637613 GSX2Q9BZM3 304 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 FAM8A1Q9UBU6 413 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
CHD2-228ENST00000637613 PCDHGB7Q9Y5F8 929 aa5.63□□□□□ -1.51
CHD2-228ENST00000637613 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.63□□□□□ -1.51
CHD2-228ENST00000637613 ARSDP51689 593 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 PLAURQ03405 335 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 MEI1Q5TIA1 1274 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 MCF2L2Q86YR7 1114 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 TTC16Q8NEE8 873 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 DCAF11Q8TEB1 546 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 PNMA5Q96PV4 448 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 CHRDQ9H2X0 955 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 C7orf69Q9H7B7 122 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 C11orf16Q9NQ32 467 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 INPP5FQ9Y2H2 1132 aa5.62□□□□□ -1.51
CHD2-228ENST00000637613 FNDC3AQ9Y2H6 1198 aaKnown RBP5.62□□□□□ -1.51
CHD2-228ENST00000637613 RTCBQ9Y3I0 505 aaKnown RBP5.62□□□□□ -1.51
CHD2-228ENST00000637613 EGFRP00533 1210 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 DNAJA1P31689 397 aaKnown RBP5.61□□□□□ -1.51
CHD2-228ENST00000637613 GTF2F1P35269 517 aaKnown RBP eCLIP5.61□□□□□ -1.51
CHD2-228ENST00000637613 CCDC144BQ3MJ40 725 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 SOGA3Q5TF21 947 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 ELMSAN1Q6PJG2 1045 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 BTLAQ7Z6A9 289 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 TRIM42Q8IWZ5 723 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 GALNT12Q8IXK2 581 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 ARMC10Q8N2F6 343 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 RASGRP4Q8TDF6 673 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 ANKRD24Q8TF21 1146 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 ELP3Q9H9T3 547 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 GGT7Q9UJ14 662 aa5.61□□□□□ -1.51
CHD2-228ENST00000637613 TLDC2A0PJX2 215 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 USP17L7P0C7H9 530 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 ATF4P18848 351 aaPredicted RBP5.6□□□□□ -1.51
CHD2-228ENST00000637613 NFKB1P19838 968 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 CDK11BP21127 795 aaKnown RBP5.6□□□□□ -1.51
CHD2-228ENST00000637613 UVSSAQ2YD98 709 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 ZNF438Q7Z4V0 828 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.51
CHD2-228ENST00000637613 NOC4LQ9BVI4 516 aaKnown RBP5.6□□□□□ -1.51
CHD2-228ENST00000637613 HIRIP3Q9BW71 556 aaPredicted RBP5.6□□□□□ -1.51
CHD2-228ENST00000637613 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 TMEM63CQ9P1W3 806 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 ANGEL1Q9UNK9 670 aaKnown RBP5.6□□□□□ -1.51
CHD2-228ENST00000637613 CDK11AQ9UQ88 783 aaPredicted RBP5.6□□□□□ -1.51
CHD2-228ENST00000637613 TBX22Q9Y458 520 aa5.6□□□□□ -1.51
CHD2-228ENST00000637613 PHACTR2O75167 634 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 MAP3K6O95382 1288 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 CCINQ13939 588 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 ZNF648Q5T619 568 aaPredicted RBP5.59□□□□□ -1.51
CHD2-228ENST00000637613 KIAA0319Q5VV43 1072 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.59□□□□□ -1.51
CHD2-228ENST00000637613 VPS37DQ86XT2 251 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 MAP4K3Q8IVH8 894 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 GLIS3Q8NEA6 775 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 TRPM4Q8TD43 1214 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 RSRP1Q9BUV0 290 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 BCO2Q9BYV7 579 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 CEP41Q9BYV8 373 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 PIF1Q9H611 641 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 USP20Q9Y2K6 914 aa5.59□□□□□ -1.51
CHD2-228ENST00000637613 HMX2A2RU54 273 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 UBAP1LF5GYI3 381 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 PAK2Q13177 524 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 GRM2Q14416 872 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 NXPE4Q6UWF7 544 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 SHKBP1Q8TBC3 707 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 NPHS2Q9NP85 383 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 COPRSQ9NQ92 184 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 CNTN3Q9P232 1028 aa5.58□□□□□ -1.52
CHD2-228ENST00000637613 ZBTB42B2RXF5 422 aa5.57□□□□□ -1.52
CHD2-228ENST00000637613 NCLP19338 710 aaKnown RBP5.57□□□□□ -1.52
CHD2-228ENST00000637613 ZNF124Q15973 351 aa5.57□□□□□ -1.52
CHD2-228ENST00000637613 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
CHD2-228ENST00000637613 ZNF746Q6NUN9 644 aaPredicted RBP5.57□□□□□ -1.52
CHD2-228ENST00000637613 CMTR1Q8N1G2 835 aaKnown RBP5.57□□□□□ -1.52
CHD2-228ENST00000637613 C1orf127Q8N9H9 656 aa5.57□□□□□ -1.52
CHD2-228ENST00000637613 PMEPA1Q969W9 287 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms