RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 LRRC24Q50LG9 513 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 AKNAD1Q5T1N1 836 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ABCF2Q9UG63 623 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 PNPLA7Q6ZV29 1317 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 PPP1R2P41236 205 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 CCDC150Q8NCX0 1101 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 WDR66Q8TBY9 1149 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 POLR3EQ9NVU0 708 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ASAP1Q9ULH1 1129 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ZBTB1Q9Y2K1 713 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 PDE6AP16499 860 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 PDIA3P30101 505 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 TYRO3Q06418 890 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 VIRMAQ69YN4 1812 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 NUTM2BA6NNL0 878 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 NUTM2EB1AL46 878 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 OFD1O75665 1012 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 CYP7A1P22680 504 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 APOBRQ0VD83 1088 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF804AQ7Z570 1209 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 NUTM2AQ8IVF1 878 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 RTEL1Q9NZ71 1219 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ARPP21Q9UBL0 812 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ZDHHC9Q9Y397 364 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ADCY5O95622 1261 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ST5P78524 1137 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 TPRNQ4KMQ1 711 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 DZIP1Q86YF9 867 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 PDCL2Q8N4E4 241 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 GPT2Q8TD30 523 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 AGXT2Q9BYV1 514 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 JCADQ9P266 1359 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 FBXO18Q8NFZ0 1043 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 TBC1D22AQ8WUA7 517 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 TAOK2Q9UL54 1235 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 PDS5AQ29RF7 1337 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 TSR1Q2NL82 804 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 LZTS2Q9BRK4 669 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 RBSNQ9H1K0 784 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 RFC4P35249 363 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 NSUN7Q8NE18 718 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 JARID2Q92833 1246 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 CCDC85AQ96PX6 553 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 BCL9O00512 1426 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 FGAP02671 866 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 CDK11BP21127 795 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 CCT2P78371 535 aaKnown RBP5.26□□□□□ -1.57
SCN1A-210ENST00000635776 SPAG1Q07617 926 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 LRRC27Q9C0I9 530 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF532Q9HCE3 1301 aa5.26□□□□□ -1.57
SCN1A-210ENST00000635776 CUTAO60888 179 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SEMA3FQ13275 785 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 TPD52L1Q16890 204 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 LRP10Q7Z4F1 713 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 IFNL3Q8IZI9 196 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 TXLNBQ8N3L3 684 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 CCDC112Q8NEF3 446 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 GREM2Q9H772 168 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 GDPD2Q9HCC8 539 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 ATP8A2Q9NTI2 1148 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 IQSEC3Q9UPP2 1182 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 RIPOR2Q9Y4F9 1068 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 EXOSC10Q01780 885 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SOGA3Q5TF21 947 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 MYSM1Q5VVJ2 828 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF594Q96JF6 807 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 NAP1L4Q99733 375 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 LEMD3Q9Y2U8 911 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SPATA31A1Q5TZJ5 1347 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 PPP6R2O75170 966 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 MBD4O95243 580 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 HCLS1P14317 486 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 CRKLP46109 303 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 STIM1Q13586 685 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 GALNT17Q6IS24 598 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF589Q86UQ0 364 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 RAB34Q9BZG1 259 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 BSDC1Q9NW68 430 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 IMPACTQ9P2X3 320 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 HIBADHP31937 336 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 TOB2Q14106 344 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SF3B3Q15393 1217 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 RRP12Q5JTH9 1297 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SGMS1Q86VZ5 419 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 RPGRQ92834 1020 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SMARCE1Q969G3 411 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SPATA31A6Q5VVP1 1343 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 DDAH1O94760 285 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 RPS8P62241 208 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 FLAD1Q8NFF5 587 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 BRIP1Q9BX63 1249 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 IFNAR1P17181 557 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 ANO1Q5XXA6 986 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 CDC37L1Q7L3B6 337 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 TRIML1Q8N9V2 468 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 PANK2Q9BZ23 570 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 RMND1Q9NWS8 449 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 TFIP11Q9UBB9 837 aaKnown RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 PAXBP1Q9Y5B6 917 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms