RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 XDHP47989 1333 aa19.28■□□□□ 0.68
LDB3-208ENST00000623007 GOLGA6L3A6NEY3 463 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 FOXP2O15409 715 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 BBOX1O75936 387 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 PCP11498 1178 aaKnown RBP19.27■□□□□ 0.68
LDB3-208ENST00000623007 SLFNL1Q499Z3 407 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 PRR5LQ6MZQ0 368 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 GIMAP6Q6P9H5 292 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 CERS3Q8IU89 383 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 KRT23Q9C075 422 aa19.27■□□□□ 0.68
LDB3-208ENST00000623007 SERPINB2P05120 415 aa19.27■□□□□ 0.67
LDB3-208ENST00000623007 MB21D2Q8IYB1 491 aaPredicted RBP19.27■□□□□ 0.67
LDB3-208ENST00000623007 IFNL3Q8IZI9 196 aa19.27■□□□□ 0.67
LDB3-208ENST00000623007 MYH13Q9UKX3 1938 aa19.26■□□□□ 0.67
LDB3-208ENST00000623007 PRPF40AO75400 957 aaKnown RBP19.26■□□□□ 0.67
LDB3-208ENST00000623007 MBD4O95243 580 aa19.26■□□□□ 0.67
LDB3-208ENST00000623007 NECAB1Q8N987 351 aa19.26■□□□□ 0.67
LDB3-208ENST00000623007 FAM184AQ8NB25 1140 aa19.26■□□□□ 0.67
LDB3-208ENST00000623007 SMARCC2Q8TAQ2 1214 aa19.26■□□□□ 0.67
LDB3-208ENST00000623007 RAI14Q9P0K7 980 aa19.26■□□□□ 0.67
LDB3-208ENST00000623007 MTMR6Q9Y217 621 aa19.26■□□□□ 0.67
LDB3-208ENST00000623007 MYO5AQ9Y4I1 1855 aaKnown RBP19.26■□□□□ 0.67
LDB3-208ENST00000623007 TNRC6CQ9HCJ0 1690 aaKnown RBP19.25■□□□□ 0.67
LDB3-208ENST00000623007 RXRBP28702 533 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
LDB3-208ENST00000623007 GYG1P46976 350 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 ST3GAL1Q11201 340 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 TTLL5Q6EMB2 1281 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 AMIGO3Q86WK7 504 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 TCEANC2Q96MN5 208 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 CRAMP1Q96RY5 1269 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 LARP6Q9BRS8 491 aaKnown RBP19.25■□□□□ 0.67
LDB3-208ENST00000623007 ZSCAN16Q9H4T2 348 aaPredicted RBP19.25■□□□□ 0.67
LDB3-208ENST00000623007 SALL1Q9NSC2 1324 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 TIAM2Q8IVF5 1701 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 MAST2Q6P0Q8 1798 aa19.25■□□□□ 0.67
LDB3-208ENST00000623007 PRC1O43663 620 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 CYP7A1P22680 504 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 ZNF804AQ7Z570 1209 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 WDR66Q8TBY9 1149 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 ABCF2Q9UG63 623 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 MAGEB6P1A0A0J9YX57 407 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 KLRG2A4D1S0 409 aaPredicted RBP19.24■□□□□ 0.67
LDB3-208ENST00000623007 ATP2B4P23634 1241 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 SART3Q15020 963 aaKnown RBP19.24■□□□□ 0.67
LDB3-208ENST00000623007 NAA16Q6N069 864 aaPredicted RBP19.24■□□□□ 0.67
LDB3-208ENST00000623007 ANKIB1Q9P2G1 1089 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 SLC4A4Q9Y6R1 1079 aa19.24■□□□□ 0.67
LDB3-208ENST00000623007 SNAP23O00161 211 aa19.23■□□□□ 0.67
LDB3-208ENST00000623007 TDO2P48775 406 aa19.23■□□□□ 0.67
LDB3-208ENST00000623007 CPLX2Q6PUV4 134 aaKnown RBP19.23■□□□□ 0.67
LDB3-208ENST00000623007 TMTC2Q8N394 836 aa19.23■□□□□ 0.67
LDB3-208ENST00000623007 ANGEL1Q9UNK9 670 aaKnown RBP19.23■□□□□ 0.67
LDB3-208ENST00000623007 FSD2A1L4K1 749 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 VPS37CA5D8V6 355 aaPredicted RBP19.22■□□□□ 0.67
LDB3-208ENST00000623007 CDKL5O76039 1030 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 PDIA3P30101 505 aaKnown RBP19.22■□□□□ 0.67
LDB3-208ENST00000623007 MRE11P49959 708 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 HAND2P61296 217 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 SCRN1Q12765 414 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 ATL3Q6DD88 541 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 SMIM5Q71RC9 77 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 STAG1Q8WVM7 1258 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 BRIP1Q9BX63 1249 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 TFCP2L1Q9NZI6 479 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 ANAPC4Q9UJX5 808 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 COL4A1P02462 1669 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 KIAA1551Q9HCM1 1747 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 TAF1P21675 1872 aa19.22■□□□□ 0.67
LDB3-208ENST00000623007 CCDC88AQ3V6T2 1871 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 GSG1L2A8MUP6 293 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 RCAN1P53805 252 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 KRT85P78386 507 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 GSTO1P78417 241 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 STK3Q13188 491 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 MFSD6Q6ZSS7 791 aa19.21■□□□□ 0.67
LDB3-208ENST00000623007 H3BQV1 296 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 POLRMTO00411 1230 aaKnown RBP19.2■□□□□ 0.66
LDB3-208ENST00000623007 APBA3O96018 575 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 LIFRP42702 1097 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 APOBRQ0VD83 1088 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 IFFO2Q5TF58 517 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 SCAND2PQ9GZW5 306 aaPredicted RBP19.2■□□□□ 0.66
LDB3-208ENST00000623007 ARMT1Q9H993 441 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 PODXL2Q9NZ53 605 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 CHD4Q14839 1912 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 LETM1O95202 739 aaPredicted RBP19.2■□□□□ 0.66
LDB3-208ENST00000623007 ZNF445P59923 1031 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 UBE2HP62256 183 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 NSUN7Q8NE18 718 aaKnown RBP19.2■□□□□ 0.66
LDB3-208ENST00000623007 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
LDB3-208ENST00000623007 CACNA1SQ13698 1873 aa19.19■□□□□ 0.66
LDB3-208ENST00000623007 ELP1O95163 1332 aa19.19■□□□□ 0.66
LDB3-208ENST00000623007 IRS2Q9Y4H2 1338 aa19.19■□□□□ 0.66
LDB3-208ENST00000623007 PPP2R5BQ15173 497 aa19.19■□□□□ 0.66
LDB3-208ENST00000623007 FOXD4L5Q5VV16 416 aaPredicted RBP19.19■□□□□ 0.66
LDB3-208ENST00000623007 SGMS1Q86VZ5 419 aa19.19■□□□□ 0.66
LDB3-208ENST00000623007 FOXD4L4Q8WXT5 416 aaPredicted RBP19.19■□□□□ 0.66
LDB3-208ENST00000623007 GZF1Q9H116 711 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms