RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 COL15A1P39059 1388 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 CEMIPQ8WUJ3 1361 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 GNAT3A8MTJ3 354 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 SPINT1O43278 529 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 ANP32CO43423 234 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 PTGIRP43119 386 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 PLEKHF1Q96S99 279 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 PRKRIP1Q9H875 184 aaPredicted RBP6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 PCDHGA11Q9Y5H2 935 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 USP16Q9Y5T5 823 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 LAMB4A4D0S4 1761 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 NRXN2Q9P2S2 1712 aa6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 TNRC6CQ9HCJ0 1690 aaKnown RBP6.61□□□□□ -1.35
RPRD1B-209ENST00000622494 HEG1Q9ULI3 1381 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 POLRMTO00411 1230 aaKnown RBP6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 KCNA3P22001 575 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 RFC4P35249 363 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 NFIXQ14938 502 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 KRT24Q2M2I5 525 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 NBPF10Q6P3W6 841 aaKnown RBP6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 DEPDC4Q8N2C3 294 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 NBPF15Q8N660 670 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 CFAP53Q96M91 514 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 HRH3Q9Y5N1 445 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 CCDC88AQ3V6T2 1871 aa6.6□□□□□ -1.35
RPRD1B-209ENST00000622494 ATP10DQ9P241 1426 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 DLEC1Q9Y238 1755 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 CEP350Q5VT06 3117 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 PLEKHG2Q9H7P9 1386 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 BTBD11A6QL63 1104 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 GNRH1P01148 92 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 ANXA1P04083 346 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 PRELPP51888 382 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 TEFQ10587 303 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 RALBP1Q15311 655 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 TBC1D9BQ66K14 1250 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 ZNF790Q6PG37 636 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 CCDC82Q8N4S0 544 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 NGEFQ8N5V2 710 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 GAS2L2Q8NHY3 880 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 ZFP42Q96MM3 310 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 CD2APQ9Y5K6 639 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 ARFGEF1Q9Y6D6 1849 aa6.59□□□□□ -1.35
RPRD1B-209ENST00000622494 SBF1O95248 1867 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 FAM177BA6PVY3 158 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 ZBTB7BO15156 539 aaPredicted RBP6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 DKK1O94907 266 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 UPP2O95045 317 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 LMOD1P29536 600 aaPredicted RBP6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 TM4SF1P30408 202 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 SCNN1DP51172 638 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 EIF5P55010 431 aaKnown RBP6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 GTF2IP78347 998 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 RELBQ01201 579 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 RASSF7Q02833 373 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 SCARF1Q14162 830 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 PROSER3Q2NL68 480 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 OLFM4Q6UX06 510 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 FLAD1Q8NFF5 587 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 CCDC97Q96F63 343 aaPredicted RBP6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 TRIM47Q96LD4 638 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 PURBQ96QR8 312 aaKnown RBP6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 SENP2Q9HC62 589 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 GMPR2Q9P2T1 348 aaKnown RBP6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 MKRN1Q9UHC7 482 aaKnown RBP6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 BCS1LQ9Y276 419 aa6.58□□□□□ -1.36
RPRD1B-209ENST00000622494 ADCY9O60503 1353 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 NUP98P52948 1817 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 SLX4Q8IY92 1834 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 CAMTA2O94983 1202 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 BMP2P12643 396 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 CLDN10P78369 228 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 CLN3Q13286 438 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 NFE2L2Q16236 605 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 HLFQ16534 295 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 TTLL7Q6ZT98 887 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 TRIM50Q86XT4 487 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 TTC5Q8N0Z6 440 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 KIFC2Q96AC6 838 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 XAGE2Q96GT9 111 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 NARFQ9UHQ1 456 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 PARP3Q9Y6F1 533 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 COL4A1P02462 1669 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 TAF1P21675 1872 aa6.57□□□□□ -1.36
RPRD1B-209ENST00000622494 TIAM2Q8IVF5 1701 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 POTECB2RU33 542 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 TMEM229AB2RXF0 380 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 IL2RAP01589 272 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 C6orf118Q5T5N4 469 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 FOXD4L5Q5VV16 416 aaPredicted RBP6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 NLGN1Q8N2Q7 840 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 FMNL2Q96PY5 1086 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 ETNK1Q9HBU6 452 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 ARHGEF10LQ9HCE6 1279 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 KIAA1024Q9UPX6 916 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms