RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 LCORLQ8N3X6 602 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 GTF3C6Q969F1 213 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 ANKRD2Q9GZV1 360 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 LRP5O75197 1615 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 KDM4AO75164 1064 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 GYS1P13807 737 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 CTDSPL2Q05D32 466 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
VTA1-205ENST00000620996 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 STRBPQ96SI9 672 aaKnown RBP11.71□□□□□ -0.53
VTA1-205ENST00000620996 SCN7AQ01118 1682 aa11.71□□□□□ -0.54
VTA1-205ENST00000620996 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.54
VTA1-205ENST00000620996 ZNF804BA4D1E1 1349 aa11.71□□□□□ -0.54
VTA1-205ENST00000620996 HIBADHP31937 336 aaKnown RBP11.71□□□□□ -0.54
VTA1-205ENST00000620996 MCM5P33992 734 aa11.71□□□□□ -0.54
VTA1-205ENST00000620996 SCRN1Q12765 414 aa11.71□□□□□ -0.54
VTA1-205ENST00000620996 CLEC17AQ6ZS10 378 aa11.71□□□□□ -0.54
VTA1-205ENST00000620996 FAM84BQ96KN1 310 aaPredicted RBP11.71□□□□□ -0.54
VTA1-205ENST00000620996 INCENPQ9NQS7 918 aa11.71□□□□□ -0.54
VTA1-205ENST00000620996 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.54
VTA1-205ENST00000620996 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 MINDY4BA8MYZ0 360 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 ADRA2BP18089 450 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 CDC37L1Q7L3B6 337 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
VTA1-205ENST00000620996 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 KLF18A0A0U1RQI7 1052 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 GOLGA8BA8MQT2 603 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 B4E1Z4 1266 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 PDCP20941 246 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 NFXL1Q6ZNB6 911 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 TBC1D10CQ8IV04 446 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 MTMR6Q9Y217 621 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 L1TD1Q5T7N2 865 aaKnown RBP11.7□□□□□ -0.54
VTA1-205ENST00000620996 NAA16Q6N069 864 aaPredicted RBP11.7□□□□□ -0.54
VTA1-205ENST00000620996 FAM173BQ6P4H8 233 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 USP48Q86UV5 1035 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 SDR42E1Q8WUS8 393 aa11.7□□□□□ -0.54
VTA1-205ENST00000620996 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
VTA1-205ENST00000620996 EXOSC10Q01780 885 aaKnown RBP11.69□□□□□ -0.54
VTA1-205ENST00000620996 DNM1Q05193 864 aaKnown RBP11.69□□□□□ -0.54
VTA1-205ENST00000620996 GRAPQ13588 217 aa11.69□□□□□ -0.54
VTA1-205ENST00000620996 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
VTA1-205ENST00000620996 GRAPLQ8TC17 118 aaPredicted RBP11.69□□□□□ -0.54
VTA1-205ENST00000620996 ALDH8A1Q9H2A2 487 aaPredicted RBP11.69□□□□□ -0.54
VTA1-205ENST00000620996 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
VTA1-205ENST00000620996 GUCY1B3Q02153 619 aa11.69□□□□□ -0.54
VTA1-205ENST00000620996 GPT2Q8TD30 523 aa11.69□□□□□ -0.54
VTA1-205ENST00000620996 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 CPLX1O14810 134 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 RGL2O15211 777 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
VTA1-205ENST00000620996 RXRAP19793 462 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 DYNLL1P63167 89 aaKnown RBP11.68□□□□□ -0.54
VTA1-205ENST00000620996 SLC4A8Q2Y0W8 1093 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 ADGRA1Q86SQ6 560 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 TXNRD3Q86VQ6 643 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 RXRBP28702 533 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 EPB41L4AQ9HCS5 686 aaPredicted RBP11.68□□□□□ -0.54
VTA1-205ENST00000620996 SBF2Q86WG5 1849 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 TM4SF1P30408 202 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 PROM2Q8N271 834 aa11.68□□□□□ -0.54
VTA1-205ENST00000620996 ZHX1Q9UKY1 873 aaPredicted RBP11.68□□□□□ -0.54
VTA1-205ENST00000620996 MYO5AQ9Y4I1 1855 aaKnown RBP11.67□□□□□ -0.54
VTA1-205ENST00000620996 LAMB2P55268 1798 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 PFKFB2O60825 505 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 UFL1O94874 794 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 PDIA3P30101 505 aaKnown RBP11.67□□□□□ -0.54
VTA1-205ENST00000620996 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
VTA1-205ENST00000620996 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 NEDD4P46934 1319 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 DDR1Q08345 913 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 MFSD6Q6ZSS7 791 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
VTA1-205ENST00000620996 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
VTA1-205ENST00000620996 LY75O60449 1722 aa11.67□□□□□ -0.54
VTA1-205ENST00000620996 GSG1L2A8MUP6 293 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 C6orf229H3BNL8 230 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
VTA1-205ENST00000620996 CYB5R4Q7L1T6 521 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 MICU3Q86XE3 530 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 AATFQ9NY61 560 aaKnown RBP eCLIP11.66□□□□□ -0.54
VTA1-205ENST00000620996 TFIP11Q9UBB9 837 aaKnown RBP11.66□□□□□ -0.54
VTA1-205ENST00000620996 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 MBD3O95983 291 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 GNAT2P19087 354 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 PRDX5P30044 214 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 ANTXR2P58335 489 aa11.66□□□□□ -0.54
VTA1-205ENST00000620996 TMEM67Q5HYA8 995 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms