RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 RASSF7Q02833 373 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 NEXNQ0ZGT2 675 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 GCKRQ14397 625 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 ALDH1L2Q3SY69 923 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 BEND3Q5T5X7 828 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 SPRYD7Q5W111 196 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 LYPD8Q6UX82 237 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 SLC51AQ86UW1 340 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 RPGRQ92834 1020 aaKnown RBP8.3□□□□□ -1.08
BRCC3-209ENST00000620502 RBM17Q96I25 401 aaKnown RBP8.3□□□□□ -1.08
BRCC3-209ENST00000620502 NUDT12Q9BQG2 462 aa8.3□□□□□ -1.08
BRCC3-209ENST00000620502 ABCC4O15439 1325 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 CDHR2Q9BYE9 1310 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 UTRNP46939 3433 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 CASP7P55210 303 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 SOGA3Q5TF21 947 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 C9orf131Q5VYM1 1079 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 ZNF784Q8NCA9 323 aaPredicted RBP8.29□□□□□ -1.08
BRCC3-209ENST00000620502 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
BRCC3-209ENST00000620502 BCL2L13Q9BXK5 485 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 DICER1Q9UPY3 1922 aaKnown RBP8.29□□□□□ -1.08
BRCC3-209ENST00000620502 ZBED9Q6R2W3 1325 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
BRCC3-209ENST00000620502 PDE8AO60658 829 aa8.28□□□□□ -1.08
BRCC3-209ENST00000620502 BBOX1O75936 387 aa8.28□□□□□ -1.08
BRCC3-209ENST00000620502 LMNB1P20700 586 aa8.28□□□□□ -1.08
BRCC3-209ENST00000620502 RARSP54136 660 aaKnown RBP8.28□□□□□ -1.08
BRCC3-209ENST00000620502 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
BRCC3-209ENST00000620502 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
BRCC3-209ENST00000620502 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
BRCC3-209ENST00000620502 ATP6V0A2Q9Y487 856 aa8.28□□□□□ -1.08
BRCC3-209ENST00000620502 GOLGB1Q14789 3259 aaKnown RBP8.28□□□□□ -1.08
BRCC3-209ENST00000620502 PTPRCP08575 1304 aa8.28□□□□□ -1.08
BRCC3-209ENST00000620502 MYH3P11055 1940 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 LRRC37AA6NMS7 1700 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
BRCC3-209ENST00000620502 GRAPQ13588 217 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 PTCRAQ6ISU1 281 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-209ENST00000620502 DDX46Q7L014 1031 aaKnown RBP8.27□□□□□ -1.09
BRCC3-209ENST00000620502 UBE3BQ7Z3V4 1068 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 SP8Q8IXZ3 490 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 RTKN2Q8IZC4 609 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 TTLL11Q8NHH1 800 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 GRAPLQ8TC17 118 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-209ENST00000620502 CELF1Q92879 486 aaKnown RBP8.27□□□□□ -1.09
BRCC3-209ENST00000620502 TAOK3Q9H2K8 898 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 SMC4Q9NTJ3 1288 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 RNF181Q9P0P0 153 aa8.27□□□□□ -1.09
BRCC3-209ENST00000620502 TIAM2Q8IVF5 1701 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 ZBTB24O43167 697 aaPredicted RBP8.26□□□□□ -1.09
BRCC3-209ENST00000620502 ALDH1L1O75891 902 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 CSF1RP07333 972 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 HSP90B1P14625 803 aaKnown RBP8.26□□□□□ -1.09
BRCC3-209ENST00000620502 CTSWP56202 376 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 FOXO4P98177 505 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 SLC4A10Q6U841 1118 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 TSC1Q92574 1164 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 PSMD1Q99460 953 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 PLA2G12BQ9BX93 195 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 SRCIN1Q9C0H9 1055 aa8.26□□□□□ -1.09
BRCC3-209ENST00000620502 NOB1Q9ULX3 412 aaKnown RBP8.26□□□□□ -1.09
BRCC3-209ENST00000620502 GRM8O00222 908 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 BCAR3O75815 825 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 CD2BP2O95400 341 aaKnown RBP8.25□□□□□ -1.09
BRCC3-209ENST00000620502 F12P00748 615 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-209ENST00000620502 RPS8P62241 208 aaKnown RBP8.25□□□□□ -1.09
BRCC3-209ENST00000620502 CTDSPL2Q05D32 466 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 KCNH2Q12809 1159 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 TRIM32Q13049 653 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 CCDC152Q4G0S7 254 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 ZNF697Q5TEC3 545 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 HELBQ8NG08 1087 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-209ENST00000620502 KAZALD1Q96I82 304 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 CCDC85AQ96PX6 553 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-209ENST00000620502 ZNF277Q9NRM2 450 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-209ENST00000620502 LTBP1Q14766 1721 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 UTYO14607 1347 aa8.25□□□□□ -1.09
BRCC3-209ENST00000620502 COL4A5P29400 1685 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 RTL9Q8NET4 1388 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 DUOX1Q9NRD9 1551 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 NBPF7P0C2Y1 421 aaPredicted RBP8.24□□□□□ -1.09
BRCC3-209ENST00000620502 RFC5P40937 340 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
BRCC3-209ENST00000620502 EPHA10Q5JZY3 1008 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 ZNF526Q8TF50 670 aaPredicted RBP8.24□□□□□ -1.09
BRCC3-209ENST00000620502 ARHGAP45Q92619 1136 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 RTFDC1Q9BY42 306 aaPredicted RBP8.24□□□□□ -1.09
BRCC3-209ENST00000620502 USP44Q9H0E7 712 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 GREM2Q9H772 168 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 ZC3H4Q9UPT8 1303 aaKnown RBP8.24□□□□□ -1.09
BRCC3-209ENST00000620502 SPEF2Q9C093 1822 aa8.24□□□□□ -1.09
BRCC3-209ENST00000620502 GPSM2P81274 684 aa8.23□□□□□ -1.09
BRCC3-209ENST00000620502 MPNDQ8N594 471 aa8.23□□□□□ -1.09
BRCC3-209ENST00000620502 API5Q9BZZ5 524 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms