RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 DHX16O60231 1041 aaKnown RBP18.48■□□□□ 0.55
NR1H3-235ENST00000616973 APPP05067 770 aa18.48■□□□□ 0.55
NR1H3-235ENST00000616973 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
NR1H3-235ENST00000616973 NCOA5Q9HCD5 579 aaKnown RBP18.48■□□□□ 0.55
NR1H3-235ENST00000616973 ZPR1O75312 459 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 MBD4O95243 580 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 TBC1D10CQ8IV04 446 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 RGS22Q8NE09 1264 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 SPATA32Q96LK8 384 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 RTCBQ9Y3I0 505 aaKnown RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 KLF18A0A0U1RQI7 1052 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 GNPATO15228 680 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 GTF2E1P29083 439 aaPredicted RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 CACNA1SQ13698 1873 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 ATL3Q6DD88 541 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 IFNL3Q8IZI9 196 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 LEO1Q8WVC0 666 aaPredicted RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 PDLIM2Q96JY6 352 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 GPHNQ9NQX3 736 aaPredicted RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 NAP1L2Q9ULW6 460 aaPredicted RBP18.47■□□□□ 0.55
NR1H3-235ENST00000616973 HPS5Q9UPZ3 1129 aa18.47■□□□□ 0.55
NR1H3-235ENST00000616973 ONECUT3O60422 494 aaPredicted RBP18.46■□□□□ 0.55
NR1H3-235ENST00000616973 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
NR1H3-235ENST00000616973 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
NR1H3-235ENST00000616973 EPB41L4AQ9HCS5 686 aaPredicted RBP18.46■□□□□ 0.55
NR1H3-235ENST00000616973 CFAP45Q9UL16 551 aa18.46■□□□□ 0.55
NR1H3-235ENST00000616973 MINPP1Q9UNW1 487 aa18.46■□□□□ 0.55
NR1H3-235ENST00000616973 TMEM87BQ96K49 555 aa18.45■□□□□ 0.54
NR1H3-235ENST00000616973 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
NR1H3-235ENST00000616973 SRP68Q9UHB9 627 aaKnown RBP18.45■□□□□ 0.54
NR1H3-235ENST00000616973 ANGEL1Q9UNK9 670 aaKnown RBP18.45■□□□□ 0.54
NR1H3-235ENST00000616973 GSG1L2A8MUP6 293 aa18.45■□□□□ 0.54
NR1H3-235ENST00000616973 FDPSP14324 419 aaKnown RBP18.45■□□□□ 0.54
NR1H3-235ENST00000616973 NAPBQ9H115 298 aa18.45■□□□□ 0.54
NR1H3-235ENST00000616973 TFIP11Q9UBB9 837 aaKnown RBP18.45■□□□□ 0.54
NR1H3-235ENST00000616973 GOLGA8BA8MQT2 603 aa18.44■□□□□ 0.54
NR1H3-235ENST00000616973 UVSSAQ2YD98 709 aa18.44■□□□□ 0.54
NR1H3-235ENST00000616973 CAVIN4Q5BKX8 364 aa18.44■□□□□ 0.54
NR1H3-235ENST00000616973 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
NR1H3-235ENST00000616973 CYB5R4Q7L1T6 521 aa18.44■□□□□ 0.54
NR1H3-235ENST00000616973 NBPF5PQ86XG9 351 aaPredicted RBP18.44■□□□□ 0.54
NR1H3-235ENST00000616973 CELF1Q92879 486 aaKnown RBP18.44■□□□□ 0.54
NR1H3-235ENST00000616973 ARMT1Q9H993 441 aa18.44■□□□□ 0.54
NR1H3-235ENST00000616973 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
NR1H3-235ENST00000616973 SH2B2O14492 632 aaPredicted RBP18.43■□□□□ 0.54
NR1H3-235ENST00000616973 SEMA3EO15041 775 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 ZBTB22O15209 634 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 ADD1P35611 737 aaKnown RBP18.43■□□□□ 0.54
NR1H3-235ENST00000616973 ARHGEF1Q92888 912 aaKnown RBP18.43■□□□□ 0.54
NR1H3-235ENST00000616973 FUCA2Q9BTY2 467 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 NACAP1Q9BZK3 213 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 CNNM2Q9H8M5 875 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 ECM29Q5VYK3 1845 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 CCDC88AQ3V6T2 1871 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 COL1A1P02452 1464 aaPredicted RBP18.43■□□□□ 0.54
NR1H3-235ENST00000616973 RPS8P62241 208 aaKnown RBP18.43■□□□□ 0.54
NR1H3-235ENST00000616973 SMIM5Q71RC9 77 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 RRAGDQ9NQL2 400 aaPredicted RBP18.43■□□□□ 0.54
NR1H3-235ENST00000616973 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
NR1H3-235ENST00000616973 PDS5AQ29RF7 1337 aaKnown RBP18.43■□□□□ 0.54
NR1H3-235ENST00000616973 TNRC6CQ9HCJ0 1690 aaKnown RBP18.42■□□□□ 0.54
NR1H3-235ENST00000616973 MAST2Q6P0Q8 1798 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 UBR3Q6ZT12 1888 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 GOLGA6L4A6NEF3 574 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 B4E1Z4 1266 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 GYG1P46976 350 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 HS1BP3Q53T59 392 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 LCORLQ8N3X6 602 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 ANKRD2Q9GZV1 360 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 NEDD4P46934 1319 aa18.42■□□□□ 0.54
NR1H3-235ENST00000616973 AKNAD1Q5T1N1 836 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 MEX3CQ5U5Q3 659 aaKnown RBP18.41■□□□□ 0.54
NR1H3-235ENST00000616973 FBXO33Q7Z6M2 555 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 IGDCC4Q8TDY8 1250 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 FAM84BQ96KN1 310 aaPredicted RBP18.41■□□□□ 0.54
NR1H3-235ENST00000616973 ZNF396Q96N95 335 aaPredicted RBP18.41■□□□□ 0.54
NR1H3-235ENST00000616973 MTA3Q9BTC8 594 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 KRT23Q9C075 422 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 RCOR1Q9UKL0 485 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 SLC4A4Q9Y6R1 1079 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 AFF2P51816 1311 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 FAM182BQ5T319 152 aa18.41■□□□□ 0.54
NR1H3-235ENST00000616973 DDX19AQ9NUU7 478 aaKnown RBP18.41■□□□□ 0.54
NR1H3-235ENST00000616973 CPLX1O14810 134 aa18.4■□□□□ 0.54
NR1H3-235ENST00000616973 LIG1P18858 919 aa18.4■□□□□ 0.54
NR1H3-235ENST00000616973 CYP7A1P22680 504 aa18.4■□□□□ 0.54
NR1H3-235ENST00000616973 LIFRP42702 1097 aa18.4■□□□□ 0.54
NR1H3-235ENST00000616973 NKX2-3Q8TAU0 364 aa18.4■□□□□ 0.54
NR1H3-235ENST00000616973 STAG1Q8WVM7 1258 aa18.4■□□□□ 0.54
NR1H3-235ENST00000616973 PGBD1Q96JS3 809 aa18.4■□□□□ 0.54
NR1H3-235ENST00000616973 ORC3Q9UBD5 711 aaPredicted RBP18.4■□□□□ 0.54
NR1H3-235ENST00000616973 ESPNB1AK53 854 aa18.39■□□□□ 0.53
NR1H3-235ENST00000616973 APOA5Q6Q788 366 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms