RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CHMP3Q9Y3E7 222 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 MYH13Q9UKX3 1938 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 A0A1B0GUL7 405 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 CHMLP26374 656 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 PUS3Q9BZE2 481 aaKnown RBP10.36□□□□□ -0.75
VPS11-206ENST00000614944 SIL1Q9H173 461 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 ZNF804BA4D1E1 1349 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 SEMA3EO15041 775 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 DDR1Q08345 913 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 RAD51AP2Q09MP3 1159 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 GRAPQ13588 217 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
VPS11-206ENST00000614944 PAIP2Q9BPZ3 127 aaKnown RBP10.35□□□□□ -0.75
VPS11-206ENST00000614944 C10orf71Q711Q0 1435 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 IRS2Q9Y4H2 1338 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 REC8O95072 547 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 ZNF594Q96JF6 807 aaPredicted RBP10.35□□□□□ -0.75
VPS11-206ENST00000614944 CNNM1Q9NRU3 951 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 EZH2Q15910 746 aaKnown RBP10.35□□□□□ -0.75
VPS11-206ENST00000614944 LRRFIP1Q32MZ4 808 aaKnown RBP10.35□□□□□ -0.75
VPS11-206ENST00000614944 METTL24Q5JXM2 366 aa10.35□□□□□ -0.75
VPS11-206ENST00000614944 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
VPS11-206ENST00000614944 GOLGA6L6A8MZA4 724 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 BBOX1O75936 387 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 SLC5A1P13866 664 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 RBM17Q96I25 401 aaKnown RBP10.34□□□□□ -0.75
VPS11-206ENST00000614944 MPHOSPH8Q99549 860 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 APBB1O00213 710 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 CCDC158Q5M9N0 1113 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 ANKRD23Q86SG2 305 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 FAM210AQ96ND0 272 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 DBNDD2Q9BQY9 259 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 ESYT1Q9BSJ8 1104 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 RPS8P62241 208 aaKnown RBP10.34□□□□□ -0.75
VPS11-206ENST00000614944 ZC3H12AQ5D1E8 599 aaKnown RBP10.34□□□□□ -0.75
VPS11-206ENST00000614944 C3orf67Q6ZVT6 689 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 DDX46Q7L014 1031 aaKnown RBP10.34□□□□□ -0.75
VPS11-206ENST00000614944 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
VPS11-206ENST00000614944 XAGE2Q96GT9 111 aa10.34□□□□□ -0.75
VPS11-206ENST00000614944 TLR7Q9NYK1 1049 aaKnown RBP10.34□□□□□ -0.75
VPS11-206ENST00000614944 TAF1P21675 1872 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 MED23Q9ULK4 1368 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 KLHL33A6NCF5 533 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 KIF3CO14782 793 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 PDE6BP35913 854 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 CCDC91Q7Z6B0 441 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 PIK3R5Q8WYR1 880 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 LEMD3Q9Y2U8 911 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 ZFYP08048 801 aaPredicted RBP10.33□□□□□ -0.76
VPS11-206ENST00000614944 TTF1Q15361 905 aaPredicted RBP10.33□□□□□ -0.76
VPS11-206ENST00000614944 STYK1Q6J9G0 422 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 KCNB2Q92953 911 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 CCDC8Q9H0W5 538 aaPredicted RBP10.33□□□□□ -0.76
VPS11-206ENST00000614944 MINPP1Q9UNW1 487 aa10.33□□□□□ -0.76
VPS11-206ENST00000614944 SGSM2O43147 1006 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 IFIT1P09914 478 aaKnown RBP10.32□□□□□ -0.76
VPS11-206ENST00000614944 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
VPS11-206ENST00000614944 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 SEC31BQ9NQW1 1179 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 CASQ1P31415 396 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 CHRNDQ07001 517 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 DNAJC14Q6Y2X3 702 aaPredicted RBP10.32□□□□□ -0.76
VPS11-206ENST00000614944 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
VPS11-206ENST00000614944 FAM212AQ96EL1 285 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 PARP3Q9Y6F1 533 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 LAMA4Q16363 1823 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 BRCA1P38398 1863 aaKnown RBP10.32□□□□□ -0.76
VPS11-206ENST00000614944 KDM4AO75164 1064 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 SEC24BO95487 1268 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 NPR1P16066 1061 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 LIG1P18858 919 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 POLD1P28340 1107 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 JMYQ8N9B5 988 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 USP26Q9BXU7 913 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 HELLSQ9NRZ9 838 aa10.32□□□□□ -0.76
VPS11-206ENST00000614944 ZNF646O15015 1829 aaPredicted RBP10.32□□□□□ -0.76
VPS11-206ENST00000614944 HNRNPH2P55795 449 aaKnown RBP10.31□□□□□ -0.76
VPS11-206ENST00000614944 BICDL1Q6ZP65 573 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 C22orf23Q9BZE7 217 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 JRKLQ9Y4A0 524 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 SNED1Q8TER0 1413 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 PSME4Q14997 1843 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 SALL1Q9NSC2 1324 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 SP8Q8IXZ3 490 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 DRC1Q96MC2 740 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 PAG1Q9NWQ8 432 aa10.31□□□□□ -0.76
VPS11-206ENST00000614944 XDHP47989 1333 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 ALDH1B1P30837 517 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 PPP2R5AQ15172 486 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 TTC39AQ5SRH9 613 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 ZSCAN25Q6NSZ9 544 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 DEF6Q9H4E7 631 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 H0YHG0 523 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 SRGNP10124 158 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms