RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
SSX3-204ENST00000612497 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
SSX3-204ENST00000612497 U2AF1L4Q8WU68 220 aaKnown RBP13.27□□□□□ -0.29
SSX3-204ENST00000612497 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.29
SSX3-204ENST00000612497 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
SSX3-204ENST00000612497 JAG2Q9Y219 1238 aa13.27□□□□□ -0.29
SSX3-204ENST00000612497 SPDYE5A6NIY4 337 aa13.26□□□□□ -0.29
SSX3-204ENST00000612497 SNAPC2Q13487 334 aa13.26□□□□□ -0.29
SSX3-204ENST00000612497 C17orf99Q6UX52 265 aa13.26□□□□□ -0.29
SSX3-204ENST00000612497 MYPNQ86TC9 1320 aa13.26□□□□□ -0.29
SSX3-204ENST00000612497 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
SSX3-204ENST00000612497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSX3-204ENST00000612497 ZNF70Q9UC06 446 aaPredicted RBP13.26□□□□□ -0.29
SSX3-204ENST00000612497 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
SSX3-204ENST00000612497 CHRNDQ07001 517 aa13.25□□□□□ -0.29
SSX3-204ENST00000612497 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
SSX3-204ENST00000612497 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
SSX3-204ENST00000612497 TMEM39BQ9GZU3 492 aa13.25□□□□□ -0.29
SSX3-204ENST00000612497 UNC93B1Q9H1C4 597 aa13.25□□□□□ -0.29
SSX3-204ENST00000612497 TDRD3Q9H7E2 651 aaKnown RBP13.25□□□□□ -0.29
SSX3-204ENST00000612497 MAP3K2Q9Y2U5 619 aa13.25□□□□□ -0.29
SSX3-204ENST00000612497 TCP10L2B9ZVM9 353 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 SNAP23O00161 211 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 IRF6O14896 467 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 SGPL1O95470 568 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 TFRCP02786 760 aaKnown RBP13.24□□□□□ -0.29
SSX3-204ENST00000612497 ITGA6P23229 1130 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 TNNI2P48788 182 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 FKBP1AP62942 108 aaKnown RBP13.24□□□□□ -0.29
SSX3-204ENST00000612497 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 ERO1BQ86YB8 467 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
SSX3-204ENST00000612497 ALPK3Q96L96 1907 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 ARAP2Q8WZ64 1704 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
SSX3-204ENST00000612497 IL1R1P14778 569 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 BMP8BP34820 402 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.23□□□□□ -0.29
SSX3-204ENST00000612497 MTMR10Q9NXD2 777 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 MGAMO43451 1857 aa13.23□□□□□ -0.29
SSX3-204ENST00000612497 TAF5LO75529 589 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 IGKV5-2P06315 115 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 PRKCZQ05513 592 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 ZKSCAN4Q969J2 545 aaPredicted RBP13.22□□□□□ -0.29
SSX3-204ENST00000612497 WRNIP1Q96S55 665 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 GDF15Q99988 308 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
SSX3-204ENST00000612497 TTF2Q9UNY4 1162 aaKnown RBP13.22□□□□□ -0.29
SSX3-204ENST00000612497 IRS2Q9Y4H2 1338 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 PDHXO00330 501 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 BCAMP50895 628 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 PPIL2Q13356 520 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 C15orf52Q6ZUT6 534 aaKnown RBP13.21□□□□□ -0.29
SSX3-204ENST00000612497 DZIP1LQ8IYY4 767 aaKnown RBP13.21□□□□□ -0.29
SSX3-204ENST00000612497 C7orf61Q8IZ16 206 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 DEFB118Q96PH6 123 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 SERPINA10Q9UK55 444 aa13.21□□□□□ -0.29
SSX3-204ENST00000612497 ZMYND8Q9ULU4 1186 aaPredicted RBP13.21□□□□□ -0.29
SSX3-204ENST00000612497 FCGRTP55899 365 aa13.2□□□□□ -0.3
SSX3-204ENST00000612497 CWF19L2Q2TBE0 894 aaKnown RBP13.2□□□□□ -0.3
SSX3-204ENST00000612497 LRIT3Q3SXY7 679 aa13.2□□□□□ -0.3
SSX3-204ENST00000612497 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
SSX3-204ENST00000612497 ANKRD23Q86SG2 305 aa13.2□□□□□ -0.3
SSX3-204ENST00000612497 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
SSX3-204ENST00000612497 PAWRQ96IZ0 340 aaKnown RBP13.2□□□□□ -0.3
SSX3-204ENST00000612497 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 H7C1W4 665 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 ADCY3O60266 1144 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 CAPN2P17655 700 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 MFSD14BQ5SR56 506 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 NECAB2Q7Z6G3 386 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 GABRQQ9UN88 632 aa13.19□□□□□ -0.3
SSX3-204ENST00000612497 ADGRA2Q96PE1 1338 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 A0A1B0GUL6 1792 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 ANKRD18BA2A2Z9 1011 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 INHAP05111 366 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 ELNP15502 786 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 CRKP46108 304 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 PPATQ06203 517 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 TDHQ8IZJ6 230 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 VCANP13611 3396 aa13.18□□□□□ -0.3
SSX3-204ENST00000612497 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
SSX3-204ENST00000612497 SYN1P17600 705 aa13.17□□□□□ -0.3
SSX3-204ENST00000612497 CACNB3P54284 484 aa13.17□□□□□ -0.3
SSX3-204ENST00000612497 CCDC30Q5VVM6 783 aa13.17□□□□□ -0.3
SSX3-204ENST00000612497 DIS3LQ8TF46 1054 aaKnown RBP13.17□□□□□ -0.3
SSX3-204ENST00000612497 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
SSX3-204ENST00000612497 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
SSX3-204ENST00000612497 PLA2G12BQ9BX93 195 aa13.17□□□□□ -0.3
SSX3-204ENST00000612497 UBE2OQ9C0C9 1292 aaKnown RBP13.17□□□□□ -0.3
SSX3-204ENST00000612497 PRDM6Q9NQX0 595 aa13.17□□□□□ -0.3
SSX3-204ENST00000612497 RPTORQ8N122 1335 aa13.16□□□□□ -0.3
SSX3-204ENST00000612497 LAMA2P24043 3122 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms