RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SF3A1Q15459 793 aaKnown RBP20.1■□□□□ 0.81
NEK3-206ENST00000611833 C11orf57Q6ZUT1 292 aaPredicted RBP20.1■□□□□ 0.81
NEK3-206ENST00000611833 ZNF34Q8IZ26 560 aa20.1■□□□□ 0.81
NEK3-206ENST00000611833 ENGASEQ8NFI3 743 aa20.1■□□□□ 0.81
NEK3-206ENST00000611833 IDH1O75874 414 aaKnown RBP20.1■□□□□ 0.81
NEK3-206ENST00000611833 APPP05067 770 aa20.1■□□□□ 0.81
NEK3-206ENST00000611833 NRBP1Q9UHY1 535 aa20.1■□□□□ 0.81
NEK3-206ENST00000611833 DENND2AQ9ULE3 1009 aa20.1■□□□□ 0.81
NEK3-206ENST00000611833 PCDHA7Q9UN72 937 aa20.1■□□□□ 0.81
NEK3-206ENST00000611833 COL16A1Q07092 1604 aaPredicted RBP20.1■□□□□ 0.81
NEK3-206ENST00000611833 POLR3DP05423 398 aaPredicted RBP20.09■□□□□ 0.81
NEK3-206ENST00000611833 IQCB1Q15051 598 aa20.09■□□□□ 0.81
NEK3-206ENST00000611833 STK38Q15208 465 aa20.09■□□□□ 0.81
NEK3-206ENST00000611833 MRPS27Q92552 414 aaKnown RBP20.09■□□□□ 0.81
NEK3-206ENST00000611833 CLIP2Q9UDT6 1046 aa20.09■□□□□ 0.81
NEK3-206ENST00000611833 LRP5O75197 1615 aa20.09■□□□□ 0.81
NEK3-206ENST00000611833 DOT1LQ8TEK3 1739 aa20.09■□□□□ 0.81
NEK3-206ENST00000611833 BECN2A8MW95 431 aa20.09■□□□□ 0.81
NEK3-206ENST00000611833 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
NEK3-206ENST00000611833 FBXO18Q8NFZ0 1043 aa20.09■□□□□ 0.81
NEK3-206ENST00000611833 WDR19Q8NEZ3 1342 aa20.08■□□□□ 0.81
NEK3-206ENST00000611833 CHAF1AQ13111 956 aaPredicted RBP20.08■□□□□ 0.81
NEK3-206ENST00000611833 UBE3CQ15386 1083 aa20.08■□□□□ 0.81
NEK3-206ENST00000611833 ADALQ6DHV7 355 aa20.08■□□□□ 0.81
NEK3-206ENST00000611833 HELBQ8NG08 1087 aaPredicted RBP20.08■□□□□ 0.81
NEK3-206ENST00000611833 NKX2-3Q8TAU0 364 aa20.08■□□□□ 0.81
NEK3-206ENST00000611833 ANO10Q9NW15 660 aa20.08■□□□□ 0.81
NEK3-206ENST00000611833 ZNF532Q9HCE3 1301 aa20.08■□□□□ 0.8
NEK3-206ENST00000611833 SDF4Q9BRK5 362 aa20.08■□□□□ 0.8
NEK3-206ENST00000611833 WNK3Q9BYP7 1800 aa20.08■□□□□ 0.8
NEK3-206ENST00000611833 FGFR2P21802 821 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 PUM3Q15397 648 aaKnown RBP20.07■□□□□ 0.8
NEK3-206ENST00000611833 TBC1D10CQ8IV04 446 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 LINC00301Q8NCQ3 95 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 WWC3Q9ULE0 1092 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 CLIC4Q9Y696 253 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 PDE6AP16499 860 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 LRMPQ12912 555 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 SYNE3Q6ZMZ3 975 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 BRAPQ7Z569 592 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 MTERF4Q7Z6M4 381 aaKnown RBP20.07■□□□□ 0.8
NEK3-206ENST00000611833 KCNG4Q8TDN1 519 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 LPIN2Q92539 896 aa20.07■□□□□ 0.8
NEK3-206ENST00000611833 A0A1B0GVL5 298 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 A0A1W2PQ27 194 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 A0A1W2PQ64 194 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 A0A1W2PQD8 194 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 TCRBV5S4A2TA0A5A2 114 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 MROH5Q6ZUA9 1318 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 C4AP0C0L4 1744 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 C4BP0C0L5 1744 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 ARAP2Q8WZ64 1704 aa20.06■□□□□ 0.8
NEK3-206ENST00000611833 UQCRFS1P1P0C7P4 283 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 CDC25BP30305 580 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
NEK3-206ENST00000611833 SUSD4Q5VX71 490 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 SARM1Q6SZW1 724 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 FMR1NBQ8N0W7 255 aaPredicted RBP20.05■□□□□ 0.8
NEK3-206ENST00000611833 GJB4Q9NTQ9 266 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 ANGEL1Q9UNK9 670 aaKnown RBP20.05■□□□□ 0.8
NEK3-206ENST00000611833 A0A087WWV3 80 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 MYSM1Q5VVJ2 828 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 CEP57L1Q8IYX8 460 aa20.05■□□□□ 0.8
NEK3-206ENST00000611833 SNAP23O00161 211 aa20.04■□□□□ 0.8
NEK3-206ENST00000611833 SPTLC2O15270 562 aa20.04■□□□□ 0.8
NEK3-206ENST00000611833 YEATS4O95619 227 aa20.04■□□□□ 0.8
NEK3-206ENST00000611833 NDUFA8P51970 172 aa20.04■□□□□ 0.8
NEK3-206ENST00000611833 INTS5Q6P9B9 1019 aaKnown RBP20.04■□□□□ 0.8
NEK3-206ENST00000611833 ERCC4Q92889 916 aaPredicted RBP20.04■□□□□ 0.8
NEK3-206ENST00000611833 FBXW7Q969H0 707 aa20.04■□□□□ 0.8
NEK3-206ENST00000611833 NAT10Q9H0A0 1025 aaKnown RBP20.04■□□□□ 0.8
NEK3-206ENST00000611833 GTF2F1P35269 517 aaKnown RBP eCLIP20.04■□□□□ 0.8
NEK3-206ENST00000611833 ZRSR1Q15695 479 aaKnown RBP20.04■□□□□ 0.8
NEK3-206ENST00000611833 FAM177BA6PVY3 158 aa20.03■□□□□ 0.8
NEK3-206ENST00000611833 METAP2P50579 478 aaKnown RBP eCLIP20.03■□□□□ 0.8
NEK3-206ENST00000611833 AIDAQ96BJ3 306 aa20.03■□□□□ 0.8
NEK3-206ENST00000611833 AK7Q96M32 723 aa20.03■□□□□ 0.8
NEK3-206ENST00000611833 STRBPQ96SI9 672 aaKnown RBP20.03■□□□□ 0.8
NEK3-206ENST00000611833 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
NEK3-206ENST00000611833 COL22A1Q8NFW1 1626 aaPredicted RBP20.03■□□□□ 0.8
NEK3-206ENST00000611833 PRKCSHP14314 528 aaPredicted RBP20.03■□□□□ 0.8
NEK3-206ENST00000611833 DHX40Q8IX18 779 aaKnown RBP20.03■□□□□ 0.8
NEK3-206ENST00000611833 SPATA5Q8NB90 893 aa20.03■□□□□ 0.8
NEK3-206ENST00000611833 MRFAP1L1Q96HT8 127 aa20.03■□□□□ 0.8
NEK3-206ENST00000611833 ZMYM6O95789 1325 aa20.03■□□□□ 0.8
NEK3-206ENST00000611833 KIF28PB7ZC32 967 aa20.02■□□□□ 0.8
NEK3-206ENST00000611833 CDKL5O76039 1030 aa20.02■□□□□ 0.8
NEK3-206ENST00000611833 KIF23Q02241 960 aaPredicted RBP20.02■□□□□ 0.8
NEK3-206ENST00000611833 CCDC144BQ3MJ40 725 aa20.02■□□□□ 0.8
NEK3-206ENST00000611833 CCDC144CPQ8IYA2 1237 aa20.02■□□□□ 0.8
NEK3-206ENST00000611833 SEC31BQ9NQW1 1179 aa20.02■□□□□ 0.8
NEK3-206ENST00000611833 B4E1Z4 1266 aa20.02■□□□□ 0.79
NEK3-206ENST00000611833 SH2B2O14492 632 aaPredicted RBP20.02■□□□□ 0.79
NEK3-206ENST00000611833 RASGRF1Q13972 1273 aa20.02■□□□□ 0.79
NEK3-206ENST00000611833 ANO1Q5XXA6 986 aa20.02■□□□□ 0.79
NEK3-206ENST00000611833 CPLX2Q6PUV4 134 aaKnown RBP20.02■□□□□ 0.79
NEK3-206ENST00000611833 CACTINQ8WUQ7 758 aaKnown RBP20.02■□□□□ 0.79
NEK3-206ENST00000611833 TSC1Q92574 1164 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms