RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 TMEM87BQ96K49 555 aa27.89■■■□□ 2.05
HOXA4-204ENST00000610970 CLSTN2Q9H4D0 955 aa27.89■■■□□ 2.05
HOXA4-204ENST00000610970 WWC3Q9ULE0 1092 aa27.89■■■□□ 2.05
HOXA4-204ENST00000610970 RASGRF1Q13972 1273 aa27.88■■■□□ 2.05
HOXA4-204ENST00000610970 TPRNQ4KMQ1 711 aa27.88■■■□□ 2.05
HOXA4-204ENST00000610970 TNMDQ9H2S6 317 aa27.88■■■□□ 2.05
HOXA4-204ENST00000610970 CNTNAP4Q9C0A0 1308 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 APPP05067 770 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 PGBD1Q96JS3 809 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 DACT1Q9NYF0 836 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 ANGEL1Q9UNK9 670 aaKnown RBP27.87■■■□□ 2.05
HOXA4-204ENST00000610970 FAM177BA6PVY3 158 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 GOLGA8BA8MQT2 603 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 FDPSP14324 419 aaKnown RBP27.87■■■□□ 2.05
HOXA4-204ENST00000610970 SF3B3Q15393 1217 aaKnown RBP27.87■■■□□ 2.05
HOXA4-204ENST00000610970 BICD2Q8TD16 824 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 HPS5Q9UPZ3 1129 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 ZKSCAN5Q9Y2L8 839 aa27.87■■■□□ 2.05
HOXA4-204ENST00000610970 KDM4AO75164 1064 aa27.86■■■□□ 2.05
HOXA4-204ENST00000610970 NBPF3Q9H094 633 aa27.86■■■□□ 2.05
HOXA4-204ENST00000610970 CPLX1O14810 134 aa27.85■■■□□ 2.05
HOXA4-204ENST00000610970 ZNF500O60304 480 aaPredicted RBP27.85■■■□□ 2.05
HOXA4-204ENST00000610970 PNPLA7Q6ZV29 1317 aa27.85■■■□□ 2.05
HOXA4-204ENST00000610970 SOCS7O14512 581 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 CDKL5O76039 1030 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 CHRNDQ07001 517 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 MAGEB6Q8N7X4 407 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 CNNM2Q9H8M5 875 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 CTAGE5O15320 804 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 CAVIN2O95810 425 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 RC3H1Q5TC82 1133 aaKnown RBP27.84■■■□□ 2.05
HOXA4-204ENST00000610970 TBC1D10CQ8IV04 446 aa27.84■■■□□ 2.05
HOXA4-204ENST00000610970 QTRT2Q9H974 415 aaKnown RBP27.84■■■□□ 2.05
HOXA4-204ENST00000610970 GPHNQ9NQX3 736 aaPredicted RBP27.84■■■□□ 2.05
HOXA4-204ENST00000610970 SH2B2O14492 632 aaPredicted RBP27.83■■■□□ 2.05
HOXA4-204ENST00000610970 KCNQ2O43526 872 aa27.83■■■□□ 2.05
HOXA4-204ENST00000610970 SLC10A5Q5PT55 438 aa27.83■■■□□ 2.05
HOXA4-204ENST00000610970 BRAPQ7Z569 592 aa27.83■■■□□ 2.05
HOXA4-204ENST00000610970 IFNL3Q8IZI9 196 aa27.83■■■□□ 2.05
HOXA4-204ENST00000610970 C8orf76Q96K31 380 aa27.83■■■□□ 2.05
HOXA4-204ENST00000610970 ORC3Q9UBD5 711 aaPredicted RBP27.83■■■□□ 2.05
HOXA4-204ENST00000610970 TIAM2Q8IVF5 1701 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 UBE4AQ14139 1066 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 CPLX2Q6PUV4 134 aaKnown RBP27.82■■■□□ 2.04
HOXA4-204ENST00000610970 ANKRD18AQ8IVF6 992 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 FAM200AQ8TCP9 573 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 MTA3Q9BTC8 594 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 NACAP1Q9BZK3 213 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 NAPBQ9H115 298 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 GNL3LQ9NVN8 582 aaKnown RBP27.82■■■□□ 2.04
HOXA4-204ENST00000610970 C4AP0C0L4 1744 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 C4BP0C0L5 1744 aa27.82■■■□□ 2.04
HOXA4-204ENST00000610970 PTMAP06454 111 aaKnown RBP27.81■■■□□ 2.04
HOXA4-204ENST00000610970 TYRO3Q06418 890 aa27.81■■■□□ 2.04
HOXA4-204ENST00000610970 LINC00116Q8NCU8 138 aa27.81■■■□□ 2.04
HOXA4-204ENST00000610970 FBXO18Q8NFZ0 1043 aa27.81■■■□□ 2.04
HOXA4-204ENST00000610970 SCN7AQ01118 1682 aa27.81■■■□□ 2.04
HOXA4-204ENST00000610970 MBD4O95243 580 aa27.81■■■□□ 2.04
HOXA4-204ENST00000610970 KRT23Q9C075 422 aa27.81■■■□□ 2.04
HOXA4-204ENST00000610970 BSDC1Q9NW68 430 aaPredicted RBP27.81■■■□□ 2.04
HOXA4-204ENST00000610970 RTEL1Q9NZ71 1219 aa27.81■■■□□ 2.04
HOXA4-204ENST00000610970 ZNF804BA4D1E1 1349 aa27.8■■■□□ 2.04
HOXA4-204ENST00000610970 RXRBP28702 533 aa27.8■■■□□ 2.04
HOXA4-204ENST00000610970 LIFRP42702 1097 aa27.8■■■□□ 2.04
HOXA4-204ENST00000610970 BCAMP50895 628 aa27.8■■■□□ 2.04
HOXA4-204ENST00000610970 FAM98CQ17RN3 349 aaKnown RBP27.8■■■□□ 2.04
HOXA4-204ENST00000610970 SGMS1Q86VZ5 419 aa27.8■■■□□ 2.04
HOXA4-204ENST00000610970 USP25Q9UHP3 1055 aa27.8■■■□□ 2.04
HOXA4-204ENST00000610970 ADCY5O95622 1261 aa27.79■■■□□ 2.04
HOXA4-204ENST00000610970 CYB5R4Q7L1T6 521 aa27.79■■■□□ 2.04
HOXA4-204ENST00000610970 USP28Q96RU2 1077 aa27.79■■■□□ 2.04
HOXA4-204ENST00000610970 NYXQ9GZU5 481 aa27.79■■■□□ 2.04
HOXA4-204ENST00000610970 NR1I2O75469 434 aa27.78■■■□□ 2.04
HOXA4-204ENST00000610970 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.78■■■□□ 2.04
HOXA4-204ENST00000610970 MRVI1Q9Y6F6 885 aa27.78■■■□□ 2.04
HOXA4-204ENST00000610970 A0A1B0GUL6 1792 aa27.78■■■□□ 2.04
HOXA4-204ENST00000610970 CHD4Q14839 1912 aa27.78■■■□□ 2.04
HOXA4-204ENST00000610970 METAP2P50579 478 aaKnown RBP eCLIP27.78■■■□□ 2.04
HOXA4-204ENST00000610970 SASS6Q6UVJ0 657 aa27.78■■■□□ 2.04
HOXA4-204ENST00000610970 CCDC73Q6ZRK6 1079 aa27.78■■■□□ 2.04
HOXA4-204ENST00000610970 IGDCC4Q8TDY8 1250 aa27.78■■■□□ 2.04
HOXA4-204ENST00000610970 GSG1L2A8MUP6 293 aa27.77■■■□□ 2.04
HOXA4-204ENST00000610970 CAMK4Q16566 473 aa27.77■■■□□ 2.04
HOXA4-204ENST00000610970 ERFEQ4G0M1 354 aa27.77■■■□□ 2.04
HOXA4-204ENST00000610970 AKNAD1Q5T1N1 836 aa27.77■■■□□ 2.04
HOXA4-204ENST00000610970 EPB41L4AQ9HCS5 686 aaPredicted RBP27.77■■■□□ 2.04
HOXA4-204ENST00000610970 B4E1Z4 1266 aa27.76■■■□□ 2.03
HOXA4-204ENST00000610970 YEATS4O95619 227 aa27.76■■■□□ 2.03
HOXA4-204ENST00000610970 FOSBP53539 338 aa27.76■■■□□ 2.03
HOXA4-204ENST00000610970 APOA5Q6Q788 366 aa27.76■■■□□ 2.03
HOXA4-204ENST00000610970 CCAR1Q8IX12 1150 aaKnown RBP27.76■■■□□ 2.03
HOXA4-204ENST00000610970 GJD4Q96KN9 370 aaPredicted RBP27.76■■■□□ 2.03
HOXA4-204ENST00000610970 ARMT1Q9H993 441 aa27.76■■■□□ 2.03
HOXA4-204ENST00000610970 LRP2BPQ9P2M1 347 aa27.76■■■□□ 2.03
HOXA4-204ENST00000610970 A0A1W2PQ27 194 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 A0A1W2PQ64 194 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 A0A1W2PQD8 194 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 RPS6KA4O75676 772 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 TPM3P06753 285 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms