RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LDHBP07195 334 aaKnown RBP21.5■■□□□ 1.03
VRK3-225ENST00000601912 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
VRK3-225ENST00000601912 DZIP1Q86YF9 867 aaKnown RBP21.5■■□□□ 1.03
VRK3-225ENST00000601912 NSUN4Q96CB9 384 aaKnown RBP21.5■■□□□ 1.03
VRK3-225ENST00000601912 MBD4O95243 580 aa21.49■■□□□ 1.03
VRK3-225ENST00000601912 GNAT2P19087 354 aa21.49■■□□□ 1.03
VRK3-225ENST00000601912 PRDX5P30044 214 aa21.49■■□□□ 1.03
VRK3-225ENST00000601912 NEK4P51957 841 aa21.49■■□□□ 1.03
VRK3-225ENST00000601912 MECOMQ03112 1051 aa21.49■■□□□ 1.03
VRK3-225ENST00000601912 STRBPQ96SI9 672 aaKnown RBP21.49■■□□□ 1.03
VRK3-225ENST00000601912 KRT32Q14532 448 aa21.48■■□□□ 1.03
VRK3-225ENST00000601912 TSGA10IPQ3SY00 556 aa21.48■■□□□ 1.03
VRK3-225ENST00000601912 FAM205AQ6ZU69 1335 aa21.48■■□□□ 1.03
VRK3-225ENST00000601912 MAGEB6P1A0A0J9YX57 407 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 APPP05067 770 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 PSMA5P28066 241 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 PTGER2P43116 358 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 DOK7Q18PE1 504 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 PODNQ7Z5L7 613 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 TM6SF1Q9BZW5 370 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 SLC4A3P48751 1232 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 GSTO1P78417 241 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 DALRD3Q5D0E6 543 aaKnown RBP21.47■■□□□ 1.03
VRK3-225ENST00000601912 MIGA1Q8NAN2 632 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 ARMT1Q9H993 441 aa21.47■■□□□ 1.03
VRK3-225ENST00000601912 PATL2C9JE40 543 aaKnown RBP21.46■■□□□ 1.03
VRK3-225ENST00000601912 GTF2IP78347 998 aa21.46■■□□□ 1.03
VRK3-225ENST00000601912 MFSD14BQ5SR56 506 aa21.46■■□□□ 1.03
VRK3-225ENST00000601912 JAKMIP1Q96N16 626 aaKnown RBP21.46■■□□□ 1.03
VRK3-225ENST00000601912 FGAP02671 866 aa21.45■■□□□ 1.02
VRK3-225ENST00000601912 CYP21A2P08686 494 aa21.45■■□□□ 1.02
VRK3-225ENST00000601912 IMMTQ16891 758 aaKnown RBP21.45■■□□□ 1.02
VRK3-225ENST00000601912 ADGRA1Q86SQ6 560 aa21.45■■□□□ 1.02
VRK3-225ENST00000601912 PSMD1Q99460 953 aa21.45■■□□□ 1.02
VRK3-225ENST00000601912 UPF3BQ9BZI7 483 aaKnown RBP21.45■■□□□ 1.02
VRK3-225ENST00000601912 SPON1Q9HCB6 807 aa21.45■■□□□ 1.02
VRK3-225ENST00000601912 CCDC88AQ3V6T2 1871 aa21.45■■□□□ 1.02
VRK3-225ENST00000601912 SNED1Q8TER0 1413 aa21.45■■□□□ 1.02
VRK3-225ENST00000601912 LDHCP07864 332 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 CASTP20810 708 aaKnown RBP21.44■■□□□ 1.02
VRK3-225ENST00000601912 MCM2P49736 904 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 KIAA2012Q0VF49 1180 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 TTLL5Q6EMB2 1281 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 LCORLQ8N3X6 602 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 ZNF384Q8TF68 577 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 NACAP1Q9BZK3 213 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 SUGT1Q9Y2Z0 365 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 CYP46A1Q9Y6A2 500 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 RPAP1Q9BWH6 1393 aaPredicted RBP21.44■■□□□ 1.02
VRK3-225ENST00000601912 K7ELQ4 463 aaPredicted RBP21.44■■□□□ 1.02
VRK3-225ENST00000601912 FOXP2O15409 715 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 FBXW7Q969H0 707 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 DBNDD1Q9H9R9 158 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 ZSWIM6Q9HCJ5 1215 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 SLC4A4Q9Y6R1 1079 aa21.44■■□□□ 1.02
VRK3-225ENST00000601912 MAST2Q6P0Q8 1798 aa21.43■■□□□ 1.02
VRK3-225ENST00000601912 CD2BP2O95400 341 aaKnown RBP21.43■■□□□ 1.02
VRK3-225ENST00000601912 ALX1Q15699 326 aa21.43■■□□□ 1.02
VRK3-225ENST00000601912 ADCK5Q3MIX3 580 aa21.43■■□□□ 1.02
VRK3-225ENST00000601912 ILDR2Q71H61 639 aa21.43■■□□□ 1.02
VRK3-225ENST00000601912 SLF2Q8IX21 1173 aa21.43■■□□□ 1.02
VRK3-225ENST00000601912 RIOK1Q9BRS2 568 aaKnown RBP21.43■■□□□ 1.02
VRK3-225ENST00000601912 ZNF213O14771 459 aa21.42■■□□□ 1.02
VRK3-225ENST00000601912 PPIP5K2O43314 1243 aa21.42■■□□□ 1.02
VRK3-225ENST00000601912 AOC3Q16853 763 aa21.42■■□□□ 1.02
VRK3-225ENST00000601912 NOL10Q9BSC4 688 aaKnown RBP21.42■■□□□ 1.02
VRK3-225ENST00000601912 VPS33BQ9H267 617 aa21.42■■□□□ 1.02
VRK3-225ENST00000601912 KIAA1551Q9HCM1 1747 aa21.42■■□□□ 1.02
VRK3-225ENST00000601912 ZMYM6O95789 1325 aa21.42■■□□□ 1.02
VRK3-225ENST00000601912 ECE2O60344 883 aa21.41■■□□□ 1.02
VRK3-225ENST00000601912 BLOC1S2Q6QNY1 142 aa21.41■■□□□ 1.02
VRK3-225ENST00000601912 RUFY3Q7L099 469 aa21.41■■□□□ 1.02
VRK3-225ENST00000601912 IFNL3Q8IZI9 196 aa21.41■■□□□ 1.02
VRK3-225ENST00000601912 NAPBQ9H115 298 aa21.41■■□□□ 1.02
VRK3-225ENST00000601912 GSG1L2A8MUP6 293 aa21.4■■□□□ 1.02
VRK3-225ENST00000601912 BAG3O95817 575 aa21.4■■□□□ 1.02
VRK3-225ENST00000601912 NEK1Q96PY6 1258 aa21.4■■□□□ 1.02
VRK3-225ENST00000601912 AATFQ9NY61 560 aaKnown RBP eCLIP21.4■■□□□ 1.02
VRK3-225ENST00000601912 HMGB1P09429 215 aaKnown RBP21.4■■□□□ 1.02
VRK3-225ENST00000601912 GRIK5Q16478 980 aa21.4■■□□□ 1.02
VRK3-225ENST00000601912 CERS3Q8IU89 383 aa21.4■■□□□ 1.02
VRK3-225ENST00000601912 TAF6LQ9Y6J9 622 aa21.4■■□□□ 1.02
VRK3-225ENST00000601912 CHD4Q14839 1912 aa21.4■■□□□ 1.02
VRK3-225ENST00000601912 PRKAB2O43741 272 aa21.39■■□□□ 1.01
VRK3-225ENST00000601912 TDO2P48775 406 aa21.39■■□□□ 1.01
VRK3-225ENST00000601912 DYNLL1P63167 89 aaKnown RBP21.39■■□□□ 1.01
VRK3-225ENST00000601912 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
VRK3-225ENST00000601912 CRNKL1Q9BZJ0 848 aaKnown RBP21.39■■□□□ 1.01
VRK3-225ENST00000601912 PDRG1Q9NUG6 133 aa21.39■■□□□ 1.01
VRK3-225ENST00000601912 MROH7-TTC4A0A0A0MT08 1334 aa21.38■■□□□ 1.01
VRK3-225ENST00000601912 USP17L3A6NCW0 530 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 USP17L4A6NCW7 530 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 E7EWF7 191 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 HSP90AA1P07900 732 aaKnown RBP21.37■■□□□ 1.01
VRK3-225ENST00000601912 HAND2P61296 217 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 FKBP1AP62942 108 aaKnown RBP21.37■■□□□ 1.01
VRK3-225ENST00000601912 DIXDC1Q155Q3 683 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 USP17L1Q7RTZ2 530 aa21.37■■□□□ 1.01
VRK3-225ENST00000601912 LARGE2Q8N3Y3 721 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms