RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 NACAP1Q9BZK3 213 aa23.81■■□□□ 1.4
PNKP-214ENST00000600573 ZNF213O14771 459 aa23.8■■□□□ 1.4
PNKP-214ENST00000600573 IL1R1P14778 569 aa23.8■■□□□ 1.4
PNKP-214ENST00000600573 CYP7A1P22680 504 aa23.8■■□□□ 1.4
PNKP-214ENST00000600573 TXNRD3Q86VQ6 643 aa23.8■■□□□ 1.4
PNKP-214ENST00000600573 CNKSR1Q969H4 720 aa23.8■■□□□ 1.4
PNKP-214ENST00000600573 ANKRD31Q8N7Z5 1873 aa23.79■■□□□ 1.4
PNKP-214ENST00000600573 NAA16Q6N069 864 aaPredicted RBP23.79■■□□□ 1.4
PNKP-214ENST00000600573 DHX32Q7L7V1 743 aaKnown RBP23.78■■□□□ 1.4
PNKP-214ENST00000600573 MPNDQ8N594 471 aa23.78■■□□□ 1.4
PNKP-214ENST00000600573 CD209Q9NNX6 404 aa23.78■■□□□ 1.4
PNKP-214ENST00000600573 COL1A1P02452 1464 aaPredicted RBP23.78■■□□□ 1.4
PNKP-214ENST00000600573 FOXP2O15409 715 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 MBD4O95243 580 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 APPP05067 770 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 PTMSP20962 102 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 MAGEB6P1A0A0J9YX57 407 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 E7EWF7 191 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 C6orf229H3BNL8 230 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 CPA1P15085 419 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 CC2D2BQ6DHV5 1058 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 CLEC17AQ6ZS10 378 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 ZNF622Q969S3 477 aaKnown RBP eCLIP23.77■■□□□ 1.4
PNKP-214ENST00000600573 NSUN4Q96CB9 384 aaKnown RBP23.77■■□□□ 1.4
PNKP-214ENST00000600573 EYA3Q99504 573 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 POLLQ9UGP5 575 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.77■■□□□ 1.4
PNKP-214ENST00000600573 LRRC37AA6NMS7 1700 aa23.77■■□□□ 1.4
PNKP-214ENST00000600573 GSTO1P78417 241 aa23.76■■□□□ 1.39
PNKP-214ENST00000600573 GRIPAP1Q4V328 841 aa23.76■■□□□ 1.39
PNKP-214ENST00000600573 FBXL16Q8N461 479 aa23.76■■□□□ 1.39
PNKP-214ENST00000600573 TBC1D22AQ8WUA7 517 aa23.76■■□□□ 1.39
PNKP-214ENST00000600573 CHMP4CQ96CF2 233 aa23.76■■□□□ 1.39
PNKP-214ENST00000600573 COA1Q9GZY4 146 aa23.76■■□□□ 1.39
PNKP-214ENST00000600573 CHAF1AQ13111 956 aaPredicted RBP23.75■■□□□ 1.39
PNKP-214ENST00000600573 DPP8Q6V1X1 898 aaPredicted RBP23.75■■□□□ 1.39
PNKP-214ENST00000600573 CERS3Q8IU89 383 aa23.75■■□□□ 1.39
PNKP-214ENST00000600573 IFNL3Q8IZI9 196 aa23.75■■□□□ 1.39
PNKP-214ENST00000600573 GIMAP6Q6P9H5 292 aa23.74■■□□□ 1.39
PNKP-214ENST00000600573 ZC3H12CQ9C0D7 883 aaKnown RBP23.74■■□□□ 1.39
PNKP-214ENST00000600573 NAPBQ9H115 298 aa23.74■■□□□ 1.39
PNKP-214ENST00000600573 DUOX1Q9NRD9 1551 aa23.74■■□□□ 1.39
PNKP-214ENST00000600573 MYH13Q9UKX3 1938 aa23.74■■□□□ 1.39
PNKP-214ENST00000600573 WDR19Q8NEZ3 1342 aa23.74■■□□□ 1.39
PNKP-214ENST00000600573 LDHBP07195 334 aaKnown RBP23.73■■□□□ 1.39
PNKP-214ENST00000600573 LDHCP07864 332 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 EXOSC10Q01780 885 aaKnown RBP23.73■■□□□ 1.39
PNKP-214ENST00000600573 TRDNQ13061 729 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 NCOA7Q8NI08 942 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 ARMT1Q9H993 441 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 TAF6LQ9Y6J9 622 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 SLC4A4Q9Y6R1 1079 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 PDIA4P13667 645 aaKnown RBP23.73■■□□□ 1.39
PNKP-214ENST00000600573 MECOMQ03112 1051 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 TTLL5Q6EMB2 1281 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 STOX1Q6ZVD7 989 aa23.73■■□□□ 1.39
PNKP-214ENST00000600573 GSG1L2A8MUP6 293 aa23.72■■□□□ 1.39
PNKP-214ENST00000600573 DZIP1Q86YF9 867 aaKnown RBP23.72■■□□□ 1.39
PNKP-214ENST00000600573 RIOK1Q9BRS2 568 aaKnown RBP23.72■■□□□ 1.39
PNKP-214ENST00000600573 SUGT1Q9Y2Z0 365 aa23.72■■□□□ 1.39
PNKP-214ENST00000600573 FAM205AQ6ZU69 1335 aa23.71■■□□□ 1.39
PNKP-214ENST00000600573 SLF2Q8IX21 1173 aa23.71■■□□□ 1.39
PNKP-214ENST00000600573 LCORLQ8N3X6 602 aa23.71■■□□□ 1.39
PNKP-214ENST00000600573 AGXT2Q9BYV1 514 aa23.71■■□□□ 1.39
PNKP-214ENST00000600573 GOLGA6L22H0YM25 854 aa23.7■■□□□ 1.39
PNKP-214ENST00000600573 FGD1P98174 961 aa23.7■■□□□ 1.39
PNKP-214ENST00000600573 RALYLQ86SE5 291 aaKnown RBP23.7■■□□□ 1.39
PNKP-214ENST00000600573 LTBP1Q14766 1721 aa23.7■■□□□ 1.38
PNKP-214ENST00000600573 MCM5P33992 734 aa23.7■■□□□ 1.38
PNKP-214ENST00000600573 TOB2Q14106 344 aaPredicted RBP23.7■■□□□ 1.38
PNKP-214ENST00000600573 Q6ZUG5 572 aa23.7■■□□□ 1.38
PNKP-214ENST00000600573 MIGA1Q8NAN2 632 aa23.7■■□□□ 1.38
PNKP-214ENST00000600573 CNNM2Q9H8M5 875 aa23.7■■□□□ 1.38
PNKP-214ENST00000600573 DEKP35659 375 aaKnown RBP23.69■■□□□ 1.38
PNKP-214ENST00000600573 TDO2P48775 406 aa23.69■■□□□ 1.38
PNKP-214ENST00000600573 BAG4O95429 457 aaKnown RBP23.68■■□□□ 1.38
PNKP-214ENST00000600573 LARGE1O95461 756 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 BAG3O95817 575 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 PRDX5P30044 214 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 PKP1Q13835 747 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 ADGRA1Q86SQ6 560 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 SUPT20HQ8NEM7 779 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 RTFDC1Q9BY42 306 aaPredicted RBP23.68■■□□□ 1.38
PNKP-214ENST00000600573 CRNKL1Q9BZJ0 848 aaKnown RBP23.68■■□□□ 1.38
PNKP-214ENST00000600573 RNF41Q9H4P4 317 aaPredicted RBP23.68■■□□□ 1.38
PNKP-214ENST00000600573 TPCN1Q9ULQ1 816 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 C10orf71Q711Q0 1435 aa23.68■■□□□ 1.38
PNKP-214ENST00000600573 CACNA1SQ13698 1873 aa23.67■■□□□ 1.38
PNKP-214ENST00000600573 PCP11498 1178 aaKnown RBP23.67■■□□□ 1.38
PNKP-214ENST00000600573 HAND2P61296 217 aa23.67■■□□□ 1.38
PNKP-214ENST00000600573 ME3Q16798 604 aa23.67■■□□□ 1.38
PNKP-214ENST00000600573 ZNF384Q8TF68 577 aa23.67■■□□□ 1.38
PNKP-214ENST00000600573 NOL10Q9BSC4 688 aaKnown RBP23.67■■□□□ 1.38
PNKP-214ENST00000600573 ATP8A2Q9NTI2 1148 aa23.67■■□□□ 1.38
PNKP-214ENST00000600573 BRD1O95696 1058 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 NT5C2P49902 561 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 PPP4CP60510 307 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 GSE1Q14687 1217 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 FAM163AQ96GL9 167 aaPredicted RBP23.66■■□□□ 1.38
PNKP-214ENST00000600573 GPR101Q96P66 508 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms