RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 TMOD2Q9NZR1 351 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 HMG20BQ9P0W2 317 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 LRP2BPQ9P2M1 347 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 MYH13Q9UKX3 1938 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 WNT10BO00744 389 aa15.88■□□□□ 0.13
SRRM1-223ENST00000600523 IGSF3O75054 1194 aa15.88■□□□□ 0.13
SRRM1-223ENST00000600523 EGFRP00533 1210 aa15.88■□□□□ 0.13
SRRM1-223ENST00000600523 HSPA6P17066 643 aa15.88■□□□□ 0.13
SRRM1-223ENST00000600523 GSTO1P78417 241 aa15.88■□□□□ 0.13
SRRM1-223ENST00000600523 ANGEL2Q5VTE6 544 aaKnown RBP15.88■□□□□ 0.13
SRRM1-223ENST00000600523 SPDYE2BA6NHP3 402 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 SPDYE6P0CI01 402 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 MCAMP43121 646 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 CRKP46108 304 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 APLP1P51693 650 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 TNFAIP1Q13829 316 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 NBPF9Q3BBW0 867 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 HHIPL2Q6UWX4 724 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 NOL10Q9BSC4 688 aaKnown RBP15.87■□□□□ 0.13
SRRM1-223ENST00000600523 RAI14Q9P0K7 980 aa15.87■□□□□ 0.13
SRRM1-223ENST00000600523 LDHCP07864 332 aa15.86■□□□□ 0.13
SRRM1-223ENST00000600523 TNNI2P48788 182 aa15.86■□□□□ 0.13
SRRM1-223ENST00000600523 TTF1Q15361 905 aaPredicted RBP15.86■□□□□ 0.13
SRRM1-223ENST00000600523 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
SRRM1-223ENST00000600523 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
SRRM1-223ENST00000600523 ADAMTSL1Q8N6G6 1762 aa15.85■□□□□ 0.13
SRRM1-223ENST00000600523 SMARCA5O60264 1052 aaPredicted RBP15.85■□□□□ 0.13
SRRM1-223ENST00000600523 ITGBL1O95965 494 aaPredicted RBP15.85■□□□□ 0.13
SRRM1-223ENST00000600523 PRDX5P30044 214 aa15.85■□□□□ 0.13
SRRM1-223ENST00000600523 NF2P35240 595 aa15.85■□□□□ 0.13
SRRM1-223ENST00000600523 ANKRD45Q5TZF3 282 aa15.85■□□□□ 0.13
SRRM1-223ENST00000600523 ZDHHC15Q96MV8 337 aa15.85■□□□□ 0.13
SRRM1-223ENST00000600523 GLIS2Q9BZE0 524 aaPredicted RBP15.85■□□□□ 0.13
SRRM1-223ENST00000600523 VEZTQ9HBM0 779 aa15.85■□□□□ 0.13
SRRM1-223ENST00000600523 SNRKQ9NRH2 765 aa15.85■□□□□ 0.13
SRRM1-223ENST00000600523 COL1A1P02452 1464 aaPredicted RBP15.84■□□□□ 0.13
SRRM1-223ENST00000600523 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.84■□□□□ 0.13
SRRM1-223ENST00000600523 PRMT6Q96LA8 375 aaPredicted RBP15.84■□□□□ 0.13
SRRM1-223ENST00000600523 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
SRRM1-223ENST00000600523 ZNF646O15015 1829 aaPredicted RBP15.84■□□□□ 0.13
SRRM1-223ENST00000600523 CLRN2A0PK11 232 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 TMEM88BA6NKF7 163 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 ERC2O15083 957 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 MAP3K12Q12852 859 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 GRIK5Q16478 980 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 TMED8Q6PL24 325 aaPredicted RBP15.83■□□□□ 0.12
SRRM1-223ENST00000600523 PI16Q6UXB8 463 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 ZBED3Q96IU2 234 aaPredicted RBP15.83■□□□□ 0.12
SRRM1-223ENST00000600523 ZNF408Q9H9D4 720 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 PPP2R3BQ9Y5P8 575 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 PASKQ96RG2 1323 aa15.83■□□□□ 0.12
SRRM1-223ENST00000600523 IDH1O75874 414 aaKnown RBP15.82■□□□□ 0.12
SRRM1-223ENST00000600523 CELF2O95319 508 aaKnown RBP15.82■□□□□ 0.12
SRRM1-223ENST00000600523 ATP5JP18859 108 aa15.82■□□□□ 0.12
SRRM1-223ENST00000600523 ZAP70P43403 619 aa15.82■□□□□ 0.12
SRRM1-223ENST00000600523 MECOMQ03112 1051 aa15.82■□□□□ 0.12
SRRM1-223ENST00000600523 DIXDC1Q155Q3 683 aa15.82■□□□□ 0.12
SRRM1-223ENST00000600523 NAA16Q6N069 864 aaPredicted RBP15.82■□□□□ 0.12
SRRM1-223ENST00000600523 TBC1D9Q6ZT07 1266 aa15.82■□□□□ 0.12
SRRM1-223ENST00000600523 DNAJC2Q99543 621 aaKnown RBP15.82■□□□□ 0.12
SRRM1-223ENST00000600523 TDRD3Q9H7E2 651 aaKnown RBP15.82■□□□□ 0.12
SRRM1-223ENST00000600523 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
SRRM1-223ENST00000600523 ADM5C9JUS6 153 aa15.81■□□□□ 0.12
SRRM1-223ENST00000600523 TRAF5O00463 557 aa15.81■□□□□ 0.12
SRRM1-223ENST00000600523 ASTN2O75129 1339 aaPredicted RBP15.81■□□□□ 0.12
SRRM1-223ENST00000600523 BAG3O95817 575 aa15.81■□□□□ 0.12
SRRM1-223ENST00000600523 CYP2E1P05181 493 aaPredicted RBP15.81■□□□□ 0.12
SRRM1-223ENST00000600523 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
SRRM1-223ENST00000600523 TTC41PQ6P2S7 1318 aa15.81■□□□□ 0.12
SRRM1-223ENST00000600523 C2orf69Q8N8R5 385 aa15.81■□□□□ 0.12
SRRM1-223ENST00000600523 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.81■□□□□ 0.121e-21■■□□□ 14.2
SRRM1-223ENST00000600523 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
SRRM1-223ENST00000600523 ABT1Q9ULW3 272 aaKnown RBP15.81■□□□□ 0.12
SRRM1-223ENST00000600523 DAGLAQ9Y4D2 1042 aa15.81■□□□□ 0.12
SRRM1-223ENST00000600523 MROH7-TTC4A0A0A0MT08 1334 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 MAP4K4O95819 1239 aaPredicted RBP15.8■□□□□ 0.12
SRRM1-223ENST00000600523 PLCG2P16885 1265 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 SUPT20HL1Q3ZLR7 823 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 FKBP1CQ5VVH2 108 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 B4GALNT3Q6L9W6 998 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 APOBEC3HQ6NTF7 200 aaKnown RBP15.8■□□□□ 0.12
SRRM1-223ENST00000600523 CERS3Q8IU89 383 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 SMC5Q8IY18 1101 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 HOOK2Q96ED9 719 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 CDCA5Q96FF9 252 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 FAM163AQ96GL9 167 aaPredicted RBP15.8■□□□□ 0.12
SRRM1-223ENST00000600523 DEFB129Q9H1M3 183 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 BOLA2Q9H3K6 86 aa15.8■□□□□ 0.12
SRRM1-223ENST00000600523 GOLIM4O00461 696 aa15.79■□□□□ 0.12
SRRM1-223ENST00000600523 MX1P20591 662 aa15.79■□□□□ 0.12
SRRM1-223ENST00000600523 LRRFIP1Q32MZ4 808 aaKnown RBP15.79■□□□□ 0.12
SRRM1-223ENST00000600523 ZSCAN25Q6NSZ9 544 aa15.79■□□□□ 0.12
SRRM1-223ENST00000600523 NSUN4Q96CB9 384 aaKnown RBP15.79■□□□□ 0.12
SRRM1-223ENST00000600523 HAUS7Q99871 368 aa15.79■□□□□ 0.12
SRRM1-223ENST00000600523 USP40Q9NVE5 1235 aa15.79■□□□□ 0.12
SRRM1-223ENST00000600523 PAG1Q9NWQ8 432 aa15.79■□□□□ 0.12
SRRM1-223ENST00000600523 PCDHAC2Q9Y5I4 1007 aa15.79■□□□□ 0.12
SRRM1-223ENST00000600523 GAKO14976 1311 aa15.78■□□□□ 0.12
SRRM1-223ENST00000600523 TCP10L2B9ZVM9 353 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms