RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 LRP2BPQ9P2M1 347 aa24.32■■□□□ 1.48
SHKBP1-222ENST00000600320 IDH1O75874 414 aaKnown RBP24.31■■□□□ 1.48
SHKBP1-222ENST00000600320 USP17L8P0C7I0 530 aa24.31■■□□□ 1.48
SHKBP1-222ENST00000600320 TTF1Q15361 905 aaPredicted RBP24.31■■□□□ 1.48
SHKBP1-222ENST00000600320 SPTY2D1Q68D10 685 aaPredicted RBP24.31■■□□□ 1.48
SHKBP1-222ENST00000600320 RAI14Q9P0K7 980 aa24.31■■□□□ 1.48
SHKBP1-222ENST00000600320 ADAMTSL1Q8N6G6 1762 aa24.31■■□□□ 1.48
SHKBP1-222ENST00000600320 ZNF280AP59817 542 aaPredicted RBP24.3■■□□□ 1.48
SHKBP1-222ENST00000600320 MECOMQ03112 1051 aa24.3■■□□□ 1.48
SHKBP1-222ENST00000600320 DIXDC1Q155Q3 683 aa24.3■■□□□ 1.48
SHKBP1-222ENST00000600320 PCDHAC2Q9Y5I4 1007 aa24.3■■□□□ 1.48
SHKBP1-222ENST00000600320 EGFRP00533 1210 aa24.29■■□□□ 1.48
SHKBP1-222ENST00000600320 CHGBP05060 677 aa24.29■■□□□ 1.48
SHKBP1-222ENST00000600320 DZIP1Q86YF9 867 aaKnown RBP24.29■■□□□ 1.48
SHKBP1-222ENST00000600320 KBTBD3Q8NAB2 608 aa24.29■■□□□ 1.48
SHKBP1-222ENST00000600320 NSUN4Q96CB9 384 aaKnown RBP24.29■■□□□ 1.48
SHKBP1-222ENST00000600320 MAST2Q6P0Q8 1798 aa24.29■■□□□ 1.48
SHKBP1-222ENST00000600320 LMOD1P29536 600 aaPredicted RBP24.28■■□□□ 1.48
SHKBP1-222ENST00000600320 SLFNL1Q499Z3 407 aa24.28■■□□□ 1.48
SHKBP1-222ENST00000600320 SAMD7Q7Z3H4 446 aa24.28■■□□□ 1.48
SHKBP1-222ENST00000600320 NMRK2Q9NPI5 230 aa24.28■■□□□ 1.48
SHKBP1-222ENST00000600320 HDAC9Q9UKV0 1011 aa24.28■■□□□ 1.48
SHKBP1-222ENST00000600320 TRIM6-TRIM34B2RNG4 842 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 H7C1D1 291 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 CRKP46108 304 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 MAP3K12Q12852 859 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 TRPM4Q8TD43 1214 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 EVI5LQ96CN4 794 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 RRAGCQ9HB90 399 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 HACL1Q9UJ83 578 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 MAST3O60307 1309 aa24.27■■□□□ 1.48
SHKBP1-222ENST00000600320 CFAP100Q494V2 611 aa24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 TBC1D10BQ4KMP7 808 aaPredicted RBP24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 RBM26Q5T8P6 1007 aaKnown RBP24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 OGFOD1Q8N543 542 aa24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 MAGEB6Q8N7X4 407 aa24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 RILPL2Q969X0 211 aa24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 MYOZ2Q9NPC6 264 aa24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 SCN4AP35499 1836 aa24.26■■□□□ 1.47
SHKBP1-222ENST00000600320 PDE6AP16499 860 aa24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 SDSP20132 328 aa24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 HDLBPQ00341 1268 aaKnown RBP24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 NAA16Q6N069 864 aaPredicted RBP24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 ADGRA1Q86SQ6 560 aa24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 CNTROBQ8N137 903 aa24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 FSD1Q9BTV5 496 aa24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 TAF1DQ9H5J8 278 aaPredicted RBP24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 SERPINA10Q9UK55 444 aa24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 DAGLAQ9Y4D2 1042 aa24.25■■□□□ 1.47
SHKBP1-222ENST00000600320 MYH2Q9UKX2 1941 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 EPHX2P34913 555 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 ADD2P35612 726 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 KIF4BQ2VIQ3 1234 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 SLC9C2Q5TAH2 1124 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 TEKT1Q969V4 418 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 ZBED3Q96IU2 234 aaPredicted RBP24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 MRIQ9BWK5 157 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 GAKO14976 1311 aa24.24■■□□□ 1.47
SHKBP1-222ENST00000600320 MYH7P12883 1935 aa24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 TCRBV5S4A2TA0A5A2 114 aa24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 IQCA1LA6NCM1 817 aa24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 IGSF3O75054 1194 aa24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 CYP7A1P22680 504 aa24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 HIRAP54198 1017 aaPredicted RBP24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 HHIPL2Q6UWX4 724 aa24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 MROH7-TTC4A0A0A0MT08 1334 aa24.23■■□□□ 1.47
SHKBP1-222ENST00000600320 ZNF532Q9HCE3 1301 aa24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 MMP14P50281 582 aa24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 RBM5P52756 815 aaKnown RBP eCLIP24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 GSTO1P78417 241 aa24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 DLGAP5Q15398 846 aa24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 MTMR14Q8NCE2 650 aa24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 FAM163AQ96GL9 167 aaPredicted RBP24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 PRMT6Q96LA8 375 aaPredicted RBP24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 ZDHHC15Q96MV8 337 aa24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.22■■□□□ 1.47
SHKBP1-222ENST00000600320 ASTN2O75129 1339 aaPredicted RBP24.21■■□□□ 1.47
SHKBP1-222ENST00000600320 VEGFAP15692 232 aaPredicted RBP24.21■■□□□ 1.47
SHKBP1-222ENST00000600320 BMP2KLQ5H9B9 411 aa24.21■■□□□ 1.47
SHKBP1-222ENST00000600320 APOBEC3HQ6NTF7 200 aaKnown RBP24.21■■□□□ 1.47
SHKBP1-222ENST00000600320 AK9Q5TCS8 1911 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 SPDYE2BA6NHP3 402 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 WNT10BO00744 389 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 RNF113AO15541 343 aaKnown RBP24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 LDHCP07864 332 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 SPDYE6P0CI01 402 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 UBE3CQ15386 1083 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 NBPF9Q3BBW0 867 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 SLF2Q8IX21 1173 aa24.2■■□□□ 1.46
SHKBP1-222ENST00000600320 GPR75-ASB3A0A0A6YYF3 556 aa24.19■■□□□ 1.46
SHKBP1-222ENST00000600320 BTDP43251 543 aa24.19■■□□□ 1.46
SHKBP1-222ENST00000600320 ZSCAN25Q6NSZ9 544 aa24.19■■□□□ 1.46
SHKBP1-222ENST00000600320 GPBP1L1Q9HC44 474 aaPredicted RBP24.19■■□□□ 1.46
SHKBP1-222ENST00000600320 RFX7Q2KHR2 1363 aa24.18■■□□□ 1.46
SHKBP1-222ENST00000600320 DYNLL1P63167 89 aaKnown RBP24.18■■□□□ 1.46
SHKBP1-222ENST00000600320 USP50Q70EL3 339 aaPredicted RBP24.18■■□□□ 1.46
SHKBP1-222ENST00000600320 MIGA1Q8NAN2 632 aa24.18■■□□□ 1.46
SHKBP1-222ENST00000600320 TDRD3Q9H7E2 651 aaKnown RBP24.18■■□□□ 1.46
SHKBP1-222ENST00000600320 ZFYP08048 801 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms