RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 COL1A1P02452 1464 aaPredicted RBP23.1■■□□□ 1.29
CCDC9-205ENST00000600117 H7C1D1 291 aa23.09■■□□□ 1.29
CCDC9-205ENST00000600117 GORABQ5T7V8 394 aa23.09■■□□□ 1.29
CCDC9-205ENST00000600117 BCL11AQ9H165 835 aa23.09■■□□□ 1.29
CCDC9-205ENST00000600117 IQSEC3Q9UPP2 1182 aaPredicted RBP23.09■■□□□ 1.29
CCDC9-205ENST00000600117 FAM155AB1AL88 458 aaPredicted RBP23.08■■□□□ 1.29
CCDC9-205ENST00000600117 ARID4AP29374 1257 aaPredicted RBP23.08■■□□□ 1.29
CCDC9-205ENST00000600117 SOX10P56693 466 aa23.08■■□□□ 1.29
CCDC9-205ENST00000600117 RGMBQ6NW40 437 aa23.08■■□□□ 1.29
CCDC9-205ENST00000600117 CENPQQ7L2Z9 268 aaPredicted RBP23.08■■□□□ 1.29
CCDC9-205ENST00000600117 CHD1LQ86WJ1 897 aa23.08■■□□□ 1.29
CCDC9-205ENST00000600117 OTUD7AQ8TE49 926 aaPredicted RBP23.08■■□□□ 1.29
CCDC9-205ENST00000600117 MYH13Q9UKX3 1938 aa23.08■■□□□ 1.28
CCDC9-205ENST00000600117 FAM205AQ6ZU69 1335 aa23.08■■□□□ 1.28
CCDC9-205ENST00000600117 SALL3Q9BXA9 1300 aa23.08■■□□□ 1.28
CCDC9-205ENST00000600117 CCDC102AQ96A19 550 aa23.07■■□□□ 1.28
CCDC9-205ENST00000600117 ZNF512BQ96KM6 892 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-205ENST00000600117 LNPKQ9C0E8 428 aa23.07■■□□□ 1.28
CCDC9-205ENST00000600117 GNL3LQ9NVN8 582 aaKnown RBP23.07■■□□□ 1.28
CCDC9-205ENST00000600117 SHTN1A0MZ66 631 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 USP17L3A6NCW0 530 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 USP17L4A6NCW7 530 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 SEMA3EO15041 775 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 GTF2IP78347 998 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 RASGRF1Q13972 1273 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 SCARF1Q14162 830 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 CCDC158Q5M9N0 1113 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 PRPF38BQ5VTL8 546 aaKnown RBP23.06■■□□□ 1.28
CCDC9-205ENST00000600117 USP17L1Q7RTZ2 530 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 MICALL2Q8IY33 904 aa23.06■■□□□ 1.28
CCDC9-205ENST00000600117 PSMD14O00487 310 aa23.05■■□□□ 1.28
CCDC9-205ENST00000600117 UQCRFS1P1P0C7P4 283 aa23.05■■□□□ 1.28
CCDC9-205ENST00000600117 TTC39AQ5SRH9 613 aa23.05■■□□□ 1.28
CCDC9-205ENST00000600117 DACT2Q5SW24 774 aa23.05■■□□□ 1.28
CCDC9-205ENST00000600117 STRIP1Q5VSL9 837 aa23.05■■□□□ 1.28
CCDC9-205ENST00000600117 DPF2Q92785 391 aa23.05■■□□□ 1.28
CCDC9-205ENST00000600117 ZBTB47Q9UFB7 747 aaPredicted RBP23.05■■□□□ 1.28
CCDC9-205ENST00000600117 VIL1P09327 827 aaKnown RBP23.04■■□□□ 1.28
CCDC9-205ENST00000600117 MCAMP43121 646 aa23.04■■□□□ 1.28
CCDC9-205ENST00000600117 KIF23Q02241 960 aaPredicted RBP23.04■■□□□ 1.28
CCDC9-205ENST00000600117 DLK2Q6UY11 383 aa23.04■■□□□ 1.28
CCDC9-205ENST00000600117 KRT26Q7Z3Y9 468 aa23.04■■□□□ 1.28
CCDC9-205ENST00000600117 C2orf69Q8N8R5 385 aa23.04■■□□□ 1.28
CCDC9-205ENST00000600117 GBA2Q9HCG7 927 aaPredicted RBP23.04■■□□□ 1.28
CCDC9-205ENST00000600117 HMG20BQ9P0W2 317 aa23.04■■□□□ 1.28
CCDC9-205ENST00000600117 DENND2AQ9ULE3 1009 aa23.04■■□□□ 1.28
CCDC9-205ENST00000600117 JAG2Q9Y219 1238 aa23.04■■□□□ 1.28
CCDC9-205ENST00000600117 PDS5AQ29RF7 1337 aaKnown RBP23.04■■□□□ 1.28
CCDC9-205ENST00000600117 TTLL5Q6EMB2 1281 aa23.03■■□□□ 1.28
CCDC9-205ENST00000600117 RNF186Q9NXI6 227 aa23.03■■□□□ 1.28
CCDC9-205ENST00000600117 FRAT2O75474 233 aaPredicted RBP23.02■■□□□ 1.28
CCDC9-205ENST00000600117 TRPA1O75762 1119 aa23.02■■□□□ 1.28
CCDC9-205ENST00000600117 PDE4AP27815 886 aa23.02■■□□□ 1.28
CCDC9-205ENST00000600117 ZNF157P51786 506 aaPredicted RBP23.02■■□□□ 1.28
CCDC9-205ENST00000600117 CHAF1AQ13111 956 aaPredicted RBP23.02■■□□□ 1.28
CCDC9-205ENST00000600117 PI16Q6UXB8 463 aa23.02■■□□□ 1.28
CCDC9-205ENST00000600117 CERS5Q8N5B7 392 aa23.02■■□□□ 1.28
CCDC9-205ENST00000600117 MXD3Q9BW11 206 aa23.02■■□□□ 1.28
CCDC9-205ENST00000600117 ZBTB12Q9Y330 459 aaPredicted RBP23.02■■□□□ 1.28
CCDC9-205ENST00000600117 ATP5JP18859 108 aa23.01■■□□□ 1.27
CCDC9-205ENST00000600117 FKBP1AP62942 108 aaKnown RBP23.01■■□□□ 1.27
CCDC9-205ENST00000600117 RSBN1LQ6PCB5 846 aaPredicted RBP23.01■■□□□ 1.27
CCDC9-205ENST00000600117 SAMD7Q7Z3H4 446 aa23.01■■□□□ 1.27
CCDC9-205ENST00000600117 SPATA5Q8NB90 893 aa23.01■■□□□ 1.27
CCDC9-205ENST00000600117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCDC9-205ENST00000600117 FBXW7Q969H0 707 aa23.01■■□□□ 1.27
CCDC9-205ENST00000600117 GMLQ99445 158 aa23.01■■□□□ 1.27
CCDC9-205ENST00000600117 ECHDC1Q9NTX5 307 aa23.01■■□□□ 1.27
CCDC9-205ENST00000600117 MX1P20591 662 aa23■■□□□ 1.27
CCDC9-205ENST00000600117 TBC1D10BQ4KMP7 808 aaPredicted RBP23■■□□□ 1.27
CCDC9-205ENST00000600117 TSHZ3Q63HK5 1081 aa23■■□□□ 1.27
CCDC9-205ENST00000600117 CTU1Q7Z7A3 348 aaKnown RBP23■■□□□ 1.27
CCDC9-205ENST00000600117 STAP2Q9UGK3 403 aa23■■□□□ 1.27
CCDC9-205ENST00000600117 TTC41PQ6P2S7 1318 aa23■■□□□ 1.27
CCDC9-205ENST00000600117 WDR66Q8TBY9 1149 aa22.99■■□□□ 1.27
CCDC9-205ENST00000600117 DCPSQ96C86 337 aaKnown RBP22.99■■□□□ 1.27
CCDC9-205ENST00000600117 SNRKQ9NRH2 765 aa22.99■■□□□ 1.27
CCDC9-205ENST00000600117 SALL1Q9NSC2 1324 aa22.99■■□□□ 1.27
CCDC9-205ENST00000600117 EGFRP00533 1210 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 SLC10A3P09131 477 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 RPS12P25398 132 aaKnown RBP22.98■■□□□ 1.27
CCDC9-205ENST00000600117 ZAP70P43403 619 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 PDE1AP54750 535 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 GRIK5Q16478 980 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 MFSD14BQ5SR56 506 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 PLEKHM2Q8IWE5 1019 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 PI4K2BQ8TCG2 481 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 TBC1D22AQ8WUA7 517 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 GPATCH3Q96I76 525 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 CSRNP1Q96S65 589 aa22.98■■□□□ 1.27
CCDC9-205ENST00000600117 ADM5C9JUS6 153 aa22.97■■□□□ 1.27
CCDC9-205ENST00000600117 REM2Q8IYK8 340 aaPredicted RBP22.97■■□□□ 1.27
CCDC9-205ENST00000600117 AGBL3Q8NEM8 1001 aa22.97■■□□□ 1.27
CCDC9-205ENST00000600117 BOLA2Q9H3K6 86 aa22.97■■□□□ 1.27
CCDC9-205ENST00000600117 NDUFB9Q9Y6M9 179 aa22.97■■□□□ 1.27
CCDC9-205ENST00000600117 MYO3BQ8WXR4 1341 aa22.97■■□□□ 1.27
CCDC9-205ENST00000600117 CYP2E1P05181 493 aaPredicted RBP22.96■■□□□ 1.27
CCDC9-205ENST00000600117 HAUS7Q99871 368 aa22.96■■□□□ 1.27
CCDC9-205ENST00000600117 OSBPL3Q9H4L5 887 aa22.95■■□□□ 1.26
CCDC9-205ENST00000600117 AOX1Q06278 1338 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms