RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 CLEC17AQ6ZS10 378 aa27.42■■□□□ 1.98
SHD-204ENST00000599689 NEK1Q96PY6 1258 aa27.42■■□□□ 1.98
SHD-204ENST00000599689 ANKRD1Q15327 319 aa27.41■■□□□ 1.98
SHD-204ENST00000599689 LARP6Q9BRS8 491 aaKnown RBP27.41■■□□□ 1.98
SHD-204ENST00000599689 SH2B1Q9NRF2 756 aaPredicted RBP27.41■■□□□ 1.98
SHD-204ENST00000599689 RTKN2Q8IZC4 609 aa27.41■■□□□ 1.98
SHD-204ENST00000599689 SBF1O95248 1867 aa27.4■■□□□ 1.98
SHD-204ENST00000599689 DDX11L8A8MPP1 907 aa27.4■■□□□ 1.98
SHD-204ENST00000599689 PDE6AP16499 860 aa27.4■■□□□ 1.98
SHD-204ENST00000599689 COL9A3Q14050 684 aaPredicted RBP27.4■■□□□ 1.98
SHD-204ENST00000599689 CTNNA3Q9UI47 895 aa27.4■■□□□ 1.98
SHD-204ENST00000599689 ZNF804BA4D1E1 1349 aa27.4■■□□□ 1.98
SHD-204ENST00000599689 GPAA1O43292 621 aa27.39■■□□□ 1.98
SHD-204ENST00000599689 PKP1Q13835 747 aa27.39■■□□□ 1.98
SHD-204ENST00000599689 ANKRD2Q9GZV1 360 aa27.39■■□□□ 1.98
SHD-204ENST00000599689 TCRBV5S4A2TA0A5A2 114 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 MAP3K12Q12852 859 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 CC2D2BQ6DHV5 1058 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 OLFM4Q6UX06 510 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 GNL3LQ9NVN8 582 aaKnown RBP27.38■■□□□ 1.97
SHD-204ENST00000599689 ZNF532Q9HCE3 1301 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 FOXP2O15409 715 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 LARGE1O95461 756 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 STOX1Q6ZVD7 989 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.38■■□□□ 1.97
SHD-204ENST00000599689 FER1L6Q2WGJ9 1857 aa27.38■■□□□ 1.97
SHD-204ENST00000599689 KIF3CO14782 793 aa27.37■■□□□ 1.97
SHD-204ENST00000599689 HMGB1P09429 215 aaKnown RBP27.37■■□□□ 1.97
SHD-204ENST00000599689 ZDHHC9Q9Y397 364 aa27.37■■□□□ 1.97
SHD-204ENST00000599689 CAVIN4Q5BKX8 364 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 TPCN1Q9ULQ1 816 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 CACNA1SQ13698 1873 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 PPEF1O14829 653 aaPredicted RBP27.36■■□□□ 1.97
SHD-204ENST00000599689 GYG1P46976 350 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 TOB2Q14106 344 aaPredicted RBP27.36■■□□□ 1.97
SHD-204ENST00000599689 ME3Q16798 604 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 GRIPAP1Q4V328 841 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 TCEANC2Q96MN5 208 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 NMRK2Q9NPI5 230 aa27.36■■□□□ 1.97
SHD-204ENST00000599689 WTIPA6NIX2 430 aaPredicted RBP27.35■■□□□ 1.97
SHD-204ENST00000599689 BAG4O95429 457 aaKnown RBP27.34■■□□□ 1.97
SHD-204ENST00000599689 GRAPQ13588 217 aa27.34■■□□□ 1.97
SHD-204ENST00000599689 TTLL5Q6EMB2 1281 aa27.34■■□□□ 1.97
SHD-204ENST00000599689 GRAPLQ8TC17 118 aaPredicted RBP27.34■■□□□ 1.97
SHD-204ENST00000599689 GLTPD2A6NH11 291 aa27.33■■□□□ 1.97
SHD-204ENST00000599689 E7EWF7 191 aa27.33■■□□□ 1.97
SHD-204ENST00000599689 FGAP02671 866 aa27.33■■□□□ 1.97
SHD-204ENST00000599689 CCDC83Q8IWF9 413 aa27.33■■□□□ 1.97
SHD-204ENST00000599689 MAGEB6Q8N7X4 407 aa27.33■■□□□ 1.97
SHD-204ENST00000599689 FAM84BQ96KN1 310 aaPredicted RBP27.33■■□□□ 1.97
SHD-204ENST00000599689 SNED1Q8TER0 1413 aa27.33■■□□□ 1.96
SHD-204ENST00000599689 BRD1O95696 1058 aa27.33■■□□□ 1.96
SHD-204ENST00000599689 PTMSP20962 102 aa27.33■■□□□ 1.96
SHD-204ENST00000599689 IMMTQ16891 758 aaKnown RBP27.33■■□□□ 1.96
SHD-204ENST00000599689 DHX32Q7L7V1 743 aaKnown RBP27.33■■□□□ 1.96
SHD-204ENST00000599689 FBXO33Q7Z6M2 555 aa27.33■■□□□ 1.96
SHD-204ENST00000599689 PSMD1Q99460 953 aa27.33■■□□□ 1.96
SHD-204ENST00000599689 BBOX1O75936 387 aa27.32■■□□□ 1.96
SHD-204ENST00000599689 VPS37DQ86XT2 251 aa27.32■■□□□ 1.96
SHD-204ENST00000599689 SMC3Q9UQE7 1217 aa27.32■■□□□ 1.96
SHD-204ENST00000599689 MYH13Q9UKX3 1938 aa27.32■■□□□ 1.96
SHD-204ENST00000599689 DPY19L2Q6NUT2 758 aa27.31■■□□□ 1.96
SHD-204ENST00000599689 Q6ZUG5 572 aa27.31■■□□□ 1.96
SHD-204ENST00000599689 TMX4Q9H1E5 349 aaPredicted RBP27.31■■□□□ 1.96
SHD-204ENST00000599689 ZNF277Q9NRM2 450 aaPredicted RBP27.31■■□□□ 1.96
SHD-204ENST00000599689 DENND2AQ9ULE3 1009 aa27.31■■□□□ 1.96
SHD-204ENST00000599689 ATP6V0A2Q9Y487 856 aa27.31■■□□□ 1.96
SHD-204ENST00000599689 ST3GAL1Q11201 340 aa27.3■■□□□ 1.96
SHD-204ENST00000599689 STRBPQ96SI9 672 aaKnown RBP27.3■■□□□ 1.96
SHD-204ENST00000599689 IQSEC3Q9UPP2 1182 aaPredicted RBP27.3■■□□□ 1.96
SHD-204ENST00000599689 SEMA3EO15041 775 aa27.3■■□□□ 1.96
SHD-204ENST00000599689 EXOSC10Q01780 885 aaKnown RBP27.3■■□□□ 1.96
SHD-204ENST00000599689 AIDAQ96BJ3 306 aa27.3■■□□□ 1.96
SHD-204ENST00000599689 LRP2BPQ9P2M1 347 aa27.3■■□□□ 1.96
SHD-204ENST00000599689 GOLGA6L22H0YM25 854 aa27.29■■□□□ 1.96
SHD-204ENST00000599689 COL1A1P02452 1464 aaPredicted RBP27.29■■□□□ 1.96
SHD-204ENST00000599689 TRAK2O60296 914 aa27.28■■□□□ 1.96
SHD-204ENST00000599689 NECAB1Q8N987 351 aa27.28■■□□□ 1.96
SHD-204ENST00000599689 RRAGCQ9HB90 399 aa27.28■■□□□ 1.96
SHD-204ENST00000599689 IARSP41252 1262 aaKnown RBP27.27■■□□□ 1.96
SHD-204ENST00000599689 ZNF213O14771 459 aa27.27■■□□□ 1.96
SHD-204ENST00000599689 TOMM70O94826 608 aa27.27■■□□□ 1.96
SHD-204ENST00000599689 KLRK1P26718 216 aa27.27■■□□□ 1.96
SHD-204ENST00000599689 HIBADHP31937 336 aaKnown RBP27.27■■□□□ 1.96
SHD-204ENST00000599689 GSE1Q14687 1217 aa27.27■■□□□ 1.96
SHD-204ENST00000599689 TIAM2Q8IVF5 1701 aa27.27■■□□□ 1.96
SHD-204ENST00000599689 SP8Q8IXZ3 490 aa27.27■■□□□ 1.96
SHD-204ENST00000599689 PDS5AQ29RF7 1337 aaKnown RBP27.26■■□□□ 1.95
SHD-204ENST00000599689 WDR33Q9C0J8 1336 aaKnown RBP27.26■■□□□ 1.95
SHD-204ENST00000599689 DEKP35659 375 aaKnown RBP27.26■■□□□ 1.95
SHD-204ENST00000599689 HAND2P61296 217 aa27.26■■□□□ 1.95
SHD-204ENST00000599689 ALX1Q15699 326 aa27.26■■□□□ 1.95
SHD-204ENST00000599689 TMC4Q7Z404 712 aa27.26■■□□□ 1.95
SHD-204ENST00000599689 PATL2C9JE40 543 aaKnown RBP27.25■■□□□ 1.95
SHD-204ENST00000599689 ZBTB22O15209 634 aa27.25■■□□□ 1.95
SHD-204ENST00000599689 MBD4O95243 580 aa27.25■■□□□ 1.95
SHD-204ENST00000599689 SLC51AQ86UW1 340 aa27.25■■□□□ 1.95
SHD-204ENST00000599689 LEMD3Q9Y2U8 911 aa27.25■■□□□ 1.95
SHD-204ENST00000599689 CCDC88AQ3V6T2 1871 aa27.25■■□□□ 1.95
SHD-204ENST00000599689 IRS2Q9Y4H2 1338 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms