RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 USP2O75604 605 aaPredicted RBP18.97■□□□□ 0.63
TGFB1-202ENST00000597453 PUM3Q15397 648 aaKnown RBP18.97■□□□□ 0.63
TGFB1-202ENST00000597453 SLC10A4Q96EP9 437 aa18.97■□□□□ 0.63
TGFB1-202ENST00000597453 WNK4Q96J92 1243 aa18.97■□□□□ 0.63
TGFB1-202ENST00000597453 R3HDMLQ9H3Y0 253 aa18.97■□□□□ 0.63
TGFB1-202ENST00000597453 FRAT2O75474 233 aaPredicted RBP18.96■□□□□ 0.63
TGFB1-202ENST00000597453 CT47B1P0C2W7 299 aaPredicted RBP18.96■□□□□ 0.63
TGFB1-202ENST00000597453 ATG9AQ7Z3C6 839 aa18.96■□□□□ 0.63
TGFB1-202ENST00000597453 TBC1D22AQ8WUA7 517 aa18.96■□□□□ 0.63
TGFB1-202ENST00000597453 TEPSINQ96N21 525 aa18.96■□□□□ 0.63
TGFB1-202ENST00000597453 KIF16BQ96L93 1317 aa18.96■□□□□ 0.63
TGFB1-202ENST00000597453 TCP10L2B9ZVM9 353 aa18.95■□□□□ 0.62
TGFB1-202ENST00000597453 GPR25O00155 361 aa18.95■□□□□ 0.62
TGFB1-202ENST00000597453 IFIT1P09914 478 aaKnown RBP18.95■□□□□ 0.62
TGFB1-202ENST00000597453 UBTFL1P0CB47 393 aaPredicted RBP18.95■□□□□ 0.62
TGFB1-202ENST00000597453 ZBTB48P10074 688 aaPredicted RBP18.95■□□□□ 0.62
TGFB1-202ENST00000597453 TNFAIP1Q13829 316 aa18.95■□□□□ 0.62
TGFB1-202ENST00000597453 MANSC4A6NHS7 340 aaPredicted RBP18.94■□□□□ 0.62
TGFB1-202ENST00000597453 GJA5P36382 358 aa18.94■□□□□ 0.62
TGFB1-202ENST00000597453 IREB2P48200 963 aaKnown RBP18.94■□□□□ 0.62
TGFB1-202ENST00000597453 MLLT1Q03111 559 aaPredicted RBP18.94■□□□□ 0.62
TGFB1-202ENST00000597453 CFHR5Q9BXR6 569 aa18.94■□□□□ 0.62
TGFB1-202ENST00000597453 API5Q9BZZ5 524 aaKnown RBP18.94■□□□□ 0.62
TGFB1-202ENST00000597453 TMEM39BQ9GZU3 492 aa18.94■□□□□ 0.62
TGFB1-202ENST00000597453 UNCXA6NJT0 531 aa18.93■□□□□ 0.62
TGFB1-202ENST00000597453 IGF2BP3O00425 579 aaKnown RBP eCLIP18.93■□□□□ 0.62
TGFB1-202ENST00000597453 RARSP54136 660 aaKnown RBP18.93■□□□□ 0.62
TGFB1-202ENST00000597453 CACNB3P54284 484 aa18.93■□□□□ 0.62
TGFB1-202ENST00000597453 HDLBPQ00341 1268 aaKnown RBP18.93■□□□□ 0.62
TGFB1-202ENST00000597453 NOM1Q5C9Z4 860 aaKnown RBP18.93■□□□□ 0.62
TGFB1-202ENST00000597453 ANKRD13AQ8IZ07 590 aa18.93■□□□□ 0.62
TGFB1-202ENST00000597453 LPIN2Q92539 896 aa18.93■□□□□ 0.62
TGFB1-202ENST00000597453 TEKT1Q969V4 418 aa18.93■□□□□ 0.62
TGFB1-202ENST00000597453 SIL1Q9H173 461 aa18.93■□□□□ 0.62
TGFB1-202ENST00000597453 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
TGFB1-202ENST00000597453 SLC5A1P13866 664 aa18.92■□□□□ 0.62
TGFB1-202ENST00000597453 IFNL1Q8IU54 200 aa18.92■□□□□ 0.62
TGFB1-202ENST00000597453 MEIS3Q99687 375 aa18.92■□□□□ 0.62
TGFB1-202ENST00000597453 ZBED9Q6R2W3 1325 aa18.92■□□□□ 0.62
TGFB1-202ENST00000597453 CIAO1O76071 339 aa18.91■□□□□ 0.62
TGFB1-202ENST00000597453 TNNI2P48788 182 aa18.91■□□□□ 0.62
TGFB1-202ENST00000597453 SOX10P56693 466 aa18.91■□□□□ 0.62
TGFB1-202ENST00000597453 INHBEP58166 350 aa18.91■□□□□ 0.62
TGFB1-202ENST00000597453 ZDHHC15Q96MV8 337 aa18.91■□□□□ 0.62
TGFB1-202ENST00000597453 ELP3Q9H9T3 547 aa18.91■□□□□ 0.62
TGFB1-202ENST00000597453 HPS5Q9UPZ3 1129 aa18.91■□□□□ 0.62
TGFB1-202ENST00000597453 FKTNO75072 461 aa18.9■□□□□ 0.62
TGFB1-202ENST00000597453 ALDH1A1P00352 501 aa18.9■□□□□ 0.62
TGFB1-202ENST00000597453 ATP2B3Q16720 1220 aa18.9■□□□□ 0.62
TGFB1-202ENST00000597453 APOBEC3HQ6NTF7 200 aaKnown RBP18.9■□□□□ 0.62
TGFB1-202ENST00000597453 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.9■□□□□ 0.62
TGFB1-202ENST00000597453 MRIQ9BWK5 157 aa18.9■□□□□ 0.62
TGFB1-202ENST00000597453 PA2G4Q9UQ80 394 aaKnown RBP18.9■□□□□ 0.62
TGFB1-202ENST00000597453 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
TGFB1-202ENST00000597453 OPTNQ96CV9 577 aa18.89■□□□□ 0.61
TGFB1-202ENST00000597453 FBXO3Q9UK99 471 aa18.89■□□□□ 0.61
TGFB1-202ENST00000597453 SUGT1Q9Y2Z0 365 aa18.89■□□□□ 0.61
TGFB1-202ENST00000597453 MAST3O60307 1309 aa18.89■□□□□ 0.61
TGFB1-202ENST00000597453 VGLL4Q14135 290 aa18.88■□□□□ 0.61
TGFB1-202ENST00000597453 PKN2Q16513 984 aaKnown RBP18.88■□□□□ 0.61
TGFB1-202ENST00000597453 HHIPL2Q6UWX4 724 aa18.88■□□□□ 0.61
TGFB1-202ENST00000597453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.88■□□□□ 0.61
TGFB1-202ENST00000597453 PTPN18Q99952 460 aa18.88■□□□□ 0.61
TGFB1-202ENST00000597453 CEP126Q9P2H0 1117 aa18.88■□□□□ 0.61
TGFB1-202ENST00000597453 TNRC18O15417 2968 aaPredicted RBP18.88■□□□□ 0.61
TGFB1-202ENST00000597453 IL15P40933 162 aaPredicted RBP18.87■□□□□ 0.61
TGFB1-202ENST00000597453 PDE4DIPQ5VU43 2346 aa18.87■□□□□ 0.61
TGFB1-202ENST00000597453 INTS3Q68E01 1043 aaKnown RBP18.87■□□□□ 0.61
TGFB1-202ENST00000597453 WDR66Q8TBY9 1149 aa18.87■□□□□ 0.61
TGFB1-202ENST00000597453 ARHGAP45Q92619 1136 aa18.87■□□□□ 0.61
TGFB1-202ENST00000597453 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
TGFB1-202ENST00000597453 TESPA1A2RU30 521 aaPredicted RBP18.86■□□□□ 0.61
TGFB1-202ENST00000597453 PRDX5P30044 214 aa18.86■□□□□ 0.61
TGFB1-202ENST00000597453 ADORA1P30542 326 aa18.86■□□□□ 0.61
TGFB1-202ENST00000597453 MAP3K9P80192 1104 aa18.86■□□□□ 0.61
TGFB1-202ENST00000597453 DIXDC1Q155Q3 683 aa18.86■□□□□ 0.61
TGFB1-202ENST00000597453 FAM83AQ86UY5 434 aa18.86■□□□□ 0.61
TGFB1-202ENST00000597453 TMOD2Q9NZR1 351 aa18.86■□□□□ 0.61
TGFB1-202ENST00000597453 TNNQ9UQP3 1299 aa18.86■□□□□ 0.61
TGFB1-202ENST00000597453 PHKA1P46020 1223 aa18.85■□□□□ 0.61
TGFB1-202ENST00000597453 CRHR2Q13324 411 aa18.85■□□□□ 0.61
TGFB1-202ENST00000597453 FKBP1CQ5VVH2 108 aa18.85■□□□□ 0.61
TGFB1-202ENST00000597453 MS4A4AQ96JQ5 239 aa18.85■□□□□ 0.61
TGFB1-202ENST00000597453 HDAC5Q9UQL6 1122 aa18.85■□□□□ 0.61
TGFB1-202ENST00000597453 DAGLAQ9Y4D2 1042 aa18.85■□□□□ 0.61
TGFB1-202ENST00000597453 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
TGFB1-202ENST00000597453 RPAP1Q9BWH6 1393 aaPredicted RBP18.84■□□□□ 0.61
TGFB1-202ENST00000597453 FBXO46Q6PJ61 603 aaPredicted RBP18.84■□□□□ 0.61
TGFB1-202ENST00000597453 BRI3BPQ8WY22 251 aa18.84■□□□□ 0.61
TGFB1-202ENST00000597453 CSADQ9Y600 493 aa18.84■□□□□ 0.61
TGFB1-202ENST00000597453 SNCAIPQ9Y6H5 919 aa18.84■□□□□ 0.61
TGFB1-202ENST00000597453 MYH2Q9UKX2 1941 aa18.84■□□□□ 0.61
TGFB1-202ENST00000597453 BCAR3O75815 825 aa18.83■□□□□ 0.6
TGFB1-202ENST00000597453 TRIM27P14373 513 aa18.83■□□□□ 0.6
TGFB1-202ENST00000597453 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.6
TGFB1-202ENST00000597453 OTUD5Q96G74 571 aa18.83■□□□□ 0.6
TGFB1-202ENST00000597453 GNL3LQ9NVN8 582 aaKnown RBP18.83■□□□□ 0.6
TGFB1-202ENST00000597453 HTTP42858 3142 aa18.83■□□□□ 0.6
TGFB1-202ENST00000597453 SALL1Q9NSC2 1324 aa18.82■□□□□ 0.6
TGFB1-202ENST00000597453 CCL15-CCL14A0A0B4J2E2 113 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms