RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 GMLQ99445 158 aa12.9□□□□□ -0.34
SMAD4-214ENST00000592186 ANTXR1Q9H6X2 564 aa12.9□□□□□ -0.34
SMAD4-214ENST00000592186 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
SMAD4-214ENST00000592186 JAG2Q9Y219 1238 aa12.9□□□□□ -0.34
SMAD4-214ENST00000592186 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
SMAD4-214ENST00000592186 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
SMAD4-214ENST00000592186 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
SMAD4-214ENST00000592186 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
SMAD4-214ENST00000592186 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
SMAD4-214ENST00000592186 NAA16Q6N069 864 aaPredicted RBP12.89□□□□□ -0.35
SMAD4-214ENST00000592186 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
SMAD4-214ENST00000592186 CERS3Q8IU89 383 aa12.89□□□□□ -0.35
SMAD4-214ENST00000592186 CERS5Q8N5B7 392 aa12.89□□□□□ -0.35
SMAD4-214ENST00000592186 FAM163AQ96GL9 167 aaPredicted RBP12.89□□□□□ -0.35
SMAD4-214ENST00000592186 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
SMAD4-214ENST00000592186 GJA3Q9Y6H8 435 aa12.89□□□□□ -0.35
SMAD4-214ENST00000592186 COL4A5P29400 1685 aa12.89□□□□□ -0.35
SMAD4-214ENST00000592186 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 PRDX5P30044 214 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 MECOMQ03112 1051 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 HHIPL2Q6UWX4 724 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 NSUN4Q96CB9 384 aaKnown RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 EDC3Q96F86 508 aaKnown RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 COL1A1P02452 1464 aaPredicted RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 H7C1D1 291 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 PDE6AP16499 860 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 GMPSP49915 693 aaPredicted RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 MAGEB6Q8N7X4 407 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 RUFY2Q8WXA3 655 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 NOL10Q9BSC4 688 aaKnown RBP12.88□□□□□ -0.35
SMAD4-214ENST00000592186 MXD3Q9BW11 206 aa12.88□□□□□ -0.35
SMAD4-214ENST00000592186 BAG3O95817 575 aa12.87□□□□□ -0.35
SMAD4-214ENST00000592186 CYP7A1P22680 504 aa12.87□□□□□ -0.35
SMAD4-214ENST00000592186 LMOD1P29536 600 aaPredicted RBP12.87□□□□□ -0.35
SMAD4-214ENST00000592186 ADD2P35612 726 aa12.87□□□□□ -0.35
SMAD4-214ENST00000592186 ZNF280AP59817 542 aaPredicted RBP12.87□□□□□ -0.35
SMAD4-214ENST00000592186 L3MBTL3Q96JM7 780 aaPredicted RBP12.87□□□□□ -0.35
SMAD4-214ENST00000592186 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
SMAD4-214ENST00000592186 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
SMAD4-214ENST00000592186 CNOT7Q9UIV1 285 aaKnown RBP12.87□□□□□ -0.35
SMAD4-214ENST00000592186 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
SMAD4-214ENST00000592186 SBF1O95248 1867 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 IQCA1LA6NCM1 817 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 F8W031 263 aaPredicted RBP12.86□□□□□ -0.35
SMAD4-214ENST00000592186 CDC45O75419 566 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
SMAD4-214ENST00000592186 PLCG2P16885 1265 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 CRKP46108 304 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
SMAD4-214ENST00000592186 MTMR14Q8NCE2 650 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 APPBP2Q92624 585 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 ZDHHC15Q96MV8 337 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
SMAD4-214ENST00000592186 ZNF532Q9HCE3 1301 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 CHD4Q14839 1912 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 DICER1Q9UPY3 1922 aaKnown RBP12.85□□□□□ -0.35
SMAD4-214ENST00000592186 GPR75-ASB3A0A0A6YYF3 556 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 CHMLP26374 656 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMAD4-214ENST00000592186 PPP4CP60510 307 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 DLGAP5Q15398 846 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 GRIK5Q16478 980 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 ZMYM1Q5SVZ6 1142 aa12.85□□□□□ -0.35
SMAD4-214ENST00000592186 MROH7-TTC4A0A0A0MT08 1334 aa12.84□□□□□ -0.35
SMAD4-214ENST00000592186 GAKO14976 1311 aa12.84□□□□□ -0.35
SMAD4-214ENST00000592186 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
SMAD4-214ENST00000592186 MYO1BO43795 1136 aa12.84□□□□□ -0.35
SMAD4-214ENST00000592186 SCNN1DP51172 638 aa12.84□□□□□ -0.35
SMAD4-214ENST00000592186 MICALL2Q8IY33 904 aa12.84□□□□□ -0.35
SMAD4-214ENST00000592186 MYOZ2Q9NPC6 264 aa12.84□□□□□ -0.35
SMAD4-214ENST00000592186 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
SMAD4-214ENST00000592186 GNAT2P19087 354 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 CWC27Q6UX04 472 aaKnown RBP12.83□□□□□ -0.36
SMAD4-214ENST00000592186 ZNF384Q8TF68 577 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 AIDAQ96BJ3 306 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 ADARB2Q9NS39 739 aaKnown RBP12.83□□□□□ -0.36
SMAD4-214ENST00000592186 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 DAGLAQ9Y4D2 1042 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 CCDC88AQ3V6T2 1871 aa12.83□□□□□ -0.36
SMAD4-214ENST00000592186 SCN9AQ15858 1988 aa12.82□□□□□ -0.36
SMAD4-214ENST00000592186 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
SMAD4-214ENST00000592186 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
SMAD4-214ENST00000592186 VEGFAP15692 232 aaPredicted RBP12.82□□□□□ -0.36
SMAD4-214ENST00000592186 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
SMAD4-214ENST00000592186 USP50Q70EL3 339 aaPredicted RBP12.82□□□□□ -0.36
SMAD4-214ENST00000592186 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
SMAD4-214ENST00000592186 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms