RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 GRIK5Q16478 980 aa17.21■□□□□ 0.35
HDAC5-208ENST00000588419 ANKRD13AQ8IZ07 590 aa17.21■□□□□ 0.35
HDAC5-208ENST00000588419 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
HDAC5-208ENST00000588419 E9PSI1 815 aa17.2■□□□□ 0.34
HDAC5-208ENST00000588419 GJA5P36382 358 aa17.2■□□□□ 0.34
HDAC5-208ENST00000588419 TNNI2P48788 182 aa17.2■□□□□ 0.34
HDAC5-208ENST00000588419 CACNB3P54284 484 aa17.2■□□□□ 0.34
HDAC5-208ENST00000588419 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-208ENST00000588419 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-208ENST00000588419 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
HDAC5-208ENST00000588419 TMEM39BQ9GZU3 492 aa17.2■□□□□ 0.34
HDAC5-208ENST00000588419 TRIM17Q9Y577 477 aa17.2■□□□□ 0.34
HDAC5-208ENST00000588419 TNRC18O15417 2968 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-208ENST00000588419 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
HDAC5-208ENST00000588419 PDE8BO95263 885 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 BCAMP50895 628 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 INHBEP58166 350 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
HDAC5-208ENST00000588419 OTUD7BQ6GQQ9 843 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 TEKT1Q969V4 418 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 CFHR5Q9BXR6 569 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 TMOD2Q9NZR1 351 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 ZSWIM8A7E2V4 1837 aa17.18■□□□□ 0.34
HDAC5-208ENST00000588419 IFIT1P09914 478 aaKnown RBP17.17■□□□□ 0.34
HDAC5-208ENST00000588419 CRHR2Q13324 411 aa17.17■□□□□ 0.34
HDAC5-208ENST00000588419 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
HDAC5-208ENST00000588419 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
HDAC5-208ENST00000588419 CD99L2Q8TCZ2 262 aa17.17■□□□□ 0.34
HDAC5-208ENST00000588419 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
HDAC5-208ENST00000588419 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
HDAC5-208ENST00000588419 VGLL4Q14135 290 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 OTUD5Q96G74 571 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 CDCA7LQ96GN5 454 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 TEPSINQ96N21 525 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 SIL1Q9H173 461 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 CSADQ9Y600 493 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
HDAC5-208ENST00000588419 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
HDAC5-208ENST00000588419 UNCXA6NJT0 531 aa17.15■□□□□ 0.34
HDAC5-208ENST00000588419 SLC5A1P13866 664 aa17.15■□□□□ 0.34
HDAC5-208ENST00000588419 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
HDAC5-208ENST00000588419 OTOP1Q7RTM1 612 aa17.15■□□□□ 0.34
HDAC5-208ENST00000588419 ERO1AQ96HE7 468 aa17.15■□□□□ 0.34
HDAC5-208ENST00000588419 MAST3O60307 1309 aa17.15■□□□□ 0.34
HDAC5-208ENST00000588419 CCL15-CCL14A0A0B4J2E2 113 aa17.14■□□□□ 0.33
HDAC5-208ENST00000588419 SLC34A2O95436 690 aa17.14■□□□□ 0.33
HDAC5-208ENST00000588419 CCL15Q16663 113 aa17.14■□□□□ 0.33
HDAC5-208ENST00000588419 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-208ENST00000588419 EYA2O00167 538 aa17.13■□□□□ 0.33
HDAC5-208ENST00000588419 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-208ENST00000588419 MAP3K9P80192 1104 aa17.13■□□□□ 0.33
HDAC5-208ENST00000588419 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-208ENST00000588419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC5-208ENST00000588419 WRNIP1Q96S55 665 aa17.13■□□□□ 0.33
HDAC5-208ENST00000588419 PTPN18Q99952 460 aa17.13■□□□□ 0.33
HDAC5-208ENST00000588419 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
HDAC5-208ENST00000588419 FGFR2P21802 821 aa17.11■□□□□ 0.33
HDAC5-208ENST00000588419 RFX5P48382 616 aaPredicted RBP17.11■□□□□ 0.33
HDAC5-208ENST00000588419 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
HDAC5-208ENST00000588419 SP3Q02447 781 aa17.11■□□□□ 0.33
HDAC5-208ENST00000588419 BRI3BPQ8WY22 251 aa17.11■□□□□ 0.33
HDAC5-208ENST00000588419 LPIN2Q92539 896 aa17.11■□□□□ 0.33
HDAC5-208ENST00000588419 ZDHHC15Q96MV8 337 aa17.11■□□□□ 0.33
HDAC5-208ENST00000588419 EFCC1Q9HA90 598 aa17.11■□□□□ 0.33
HDAC5-208ENST00000588419 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-208ENST00000588419 GTF2A2P52657 109 aa17.1■□□□□ 0.33
HDAC5-208ENST00000588419 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
HDAC5-208ENST00000588419 ZKSCAN4Q969J2 545 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-208ENST00000588419 MS4A4AQ96JQ5 239 aa17.1■□□□□ 0.33
HDAC5-208ENST00000588419 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
HDAC5-208ENST00000588419 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
HDAC5-208ENST00000588419 TESPA1A2RU30 521 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-208ENST00000588419 TCP10Q12799 353 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 DIXDC1Q155Q3 683 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 PRPF38BQ5VTL8 546 aaKnown RBP17.09■□□□□ 0.33
HDAC5-208ENST00000588419 APOBEC3HQ6NTF7 200 aaKnown RBP17.09■□□□□ 0.33
HDAC5-208ENST00000588419 MIGA2Q7L4E1 593 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 FAM43AQ8N2R8 423 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 PTPN22Q9Y2R2 807 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 LRRFIP2Q9Y608 721 aaKnown RBP17.09■□□□□ 0.33
HDAC5-208ENST00000588419 SNCAIPQ9Y6H5 919 aa17.09■□□□□ 0.33
HDAC5-208ENST00000588419 POTEFA5A3E0 1075 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 SPDYE5A6NIY4 337 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 PRDX5P30044 214 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 DCAF15Q66K64 600 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 ATG9AQ7Z3C6 839 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 FAM83AQ86UY5 434 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 CEP126Q9P2H0 1117 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
HDAC5-208ENST00000588419 SUGT1Q9Y2Z0 365 aa17.08■□□□□ 0.32
HDAC5-208ENST00000588419 RPAP1Q9BWH6 1393 aaPredicted RBP17.07■□□□□ 0.32
HDAC5-208ENST00000588419 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
HDAC5-208ENST00000588419 CAP1Q01518 475 aa17.07■□□□□ 0.32
HDAC5-208ENST00000588419 HHIPL2Q6UWX4 724 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms