RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 NPHS2Q9NP85 383 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 RAB6BQ9NRW1 208 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 IL16Q14005 1332 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 HMGXB3Q12766 1538 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 ERICH4A6NGS2 130 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 TSPAN6O43657 245 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 PPFIA2O75334 1257 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 ALDH1L1O75891 902 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 ZRANB2O95218 330 aaKnown RBP eCLIP6.61□□□□□ -1.35
LINC01538-201ENST00000588074 CLCN6P51797 869 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 ADCY2Q08462 1091 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 FBXL19Q6PCT2 694 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 SHDQ96IW2 340 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 FAM53CQ9NYF3 392 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 POLKQ9UBT6 870 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 PPT2Q9UMR5 302 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 RIMBP2O15034 1052 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
LINC01538-201ENST00000588074 CRKP46108 304 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 ERVK-9P63128 1117 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 FAM160A1Q05DH4 1040 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 TTF1Q15361 905 aaPredicted RBP6.61□□□□□ -1.35
LINC01538-201ENST00000588074 C14orf80Q86SX3 495 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 ACRBPQ8NEB7 543 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 ZNF296Q8WUU4 475 aaPredicted RBP6.61□□□□□ -1.35
LINC01538-201ENST00000588074 TMPRSS4Q9NRS4 437 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 SYNPO2Q9UMS6 1093 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 CCDC88BA6NC98 1476 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 CEP164Q9UPV0 1460 aa6.61□□□□□ -1.35
LINC01538-201ENST00000588074 KCNQ2O43526 872 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 TRIM37O94972 964 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 AMOTQ4VCS5 1084 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 INTS6LQ5JSJ4 861 aaKnown RBP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 AP1ARQ63HQ0 302 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 WWC2Q6AWC2 1192 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 BPHLQ86WA6 291 aaPredicted RBP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 UBR7Q8N806 425 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 ATL2Q8NHH9 583 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 CXorf38Q8TB03 319 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 SLC4A9Q96Q91 983 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 NESP48681 1621 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 A6NJY4 79 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 DIAPH1O60610 1272 aaKnown RBP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 POLR3DP05423 398 aaPredicted RBP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 CNGA1P29973 690 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 DHX8Q14562 1220 aaKnown RBP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 HSP90B2PQ58FF3 399 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 TRERF1Q96PN7 1200 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 KCTD15Q96SI1 283 aaPredicted RBP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 SPSB2Q99619 263 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 APBA2Q99767 749 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 ARPC5LQ9BPX5 153 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 C1QTNF2Q9BXJ5 285 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 BCO2Q9BYV7 579 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 CHCHD3Q9NX63 227 aaKnown RBP6.6□□□□□ -1.35
LINC01538-201ENST00000588074 PCDHB3Q9Y5E6 796 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 MAPKBP1O60336 1514 aa6.6□□□□□ -1.35
LINC01538-201ENST00000588074 SHTN1A0MZ66 631 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 KINO60870 393 aaKnown RBP6.59□□□□□ -1.35
LINC01538-201ENST00000588074 CAND2O75155 1236 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 ASMTLO95671 621 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 SCGB1D2O95969 90 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 PSMA6P60900 246 aaKnown RBP6.59□□□□□ -1.35
LINC01538-201ENST00000588074 DDR2Q16832 855 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 MAMSTRQ6ZN01 415 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 LRP10Q7Z4F1 713 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 NLRP13Q86W25 1043 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 ALDH16A1Q8IZ83 802 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 STAG2Q8N3U4 1231 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 ZNF511Q8NB15 262 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 EXOC6Q8TAG9 804 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 CPLX3Q8WVH0 158 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 PIBF1Q8WXW3 757 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 TMX4Q9H1E5 349 aaPredicted RBP6.59□□□□□ -1.35
LINC01538-201ENST00000588074 IRAK4Q9NWZ3 460 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 SFMBT1Q9UHJ3 866 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 PFDN2Q9UHV9 154 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 HCN4Q9Y3Q4 1203 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 PARP3Q9Y6F1 533 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 SYNRGQ9UMZ2 1314 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 KAT6BQ8WYB5 2073 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 TLL1O43897 1013 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 FBXO24O75426 580 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 SKILP12757 684 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.35
LINC01538-201ENST00000588074 PDCD2Q16342 344 aaPredicted RBP6.59□□□□□ -1.35
LINC01538-201ENST00000588074 MAP3K11Q16584 847 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 C1orf53Q5VUE5 145 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 SPATC1Q76KD6 591 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 CENPQQ7L2Z9 268 aaPredicted RBP6.59□□□□□ -1.35
LINC01538-201ENST00000588074 KRT26Q7Z3Y9 468 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 THNSL2Q86YJ6 484 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 TREML1Q86YW5 311 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 KIF18AQ8NI77 898 aa6.59□□□□□ -1.35
LINC01538-201ENST00000588074 ZDHHC1Q8WTX9 485 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms