RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 HOXB7P09629 217 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 GPCPD1Q9NPB8 672 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 CERS3Q8IU89 383 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 RASAL2Q9UJF2 1139 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 FERP16591 822 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 MSANTD4Q8NCY6 345 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 CHMLP26374 656 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 SNX21Q969T3 373 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
PTPRS-205ENST00000588012 MICALCLQ6ZW33 695 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 TTC16Q8NEE8 873 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 LMBR1Q8WVP7 490 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 ARMT1Q9H993 441 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 USP21Q9UK80 565 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 HOOK2Q96ED9 719 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 XAGE2Q96GT9 111 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 CCDC175P0C221 793 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
PTPRS-205ENST00000588012 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 IL13P35225 146 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 WDR66Q8TBY9 1149 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 GRIPAP1Q4V328 841 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 FAM200AQ8TCP9 573 aa18.03■□□□□ 0.48
PTPRS-205ENST00000588012 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
PTPRS-205ENST00000588012 LARGE2Q8N3Y3 721 aa18.02■□□□□ 0.48
PTPRS-205ENST00000588012 EEF2P13639 858 aaKnown RBP18.02■□□□□ 0.48
PTPRS-205ENST00000588012 NEK11Q8NG66 645 aa18.02■□□□□ 0.48
PTPRS-205ENST00000588012 CFAP43Q8NDM7 1665 aa18.02■□□□□ 0.48
PTPRS-205ENST00000588012 PPP1R14CQ8TAE6 165 aa18.02■□□□□ 0.48
PTPRS-205ENST00000588012 SREK1Q8WXA9 508 aaKnown RBP18.02■□□□□ 0.48
PTPRS-205ENST00000588012 GJC1P36383 396 aa18.02■□□□□ 0.47
PTPRS-205ENST00000588012 CEP112Q8N8E3 955 aa18.02■□□□□ 0.47
PTPRS-205ENST00000588012 PKD2L1Q9P0L9 805 aa18.02■□□□□ 0.47
PTPRS-205ENST00000588012 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
PTPRS-205ENST00000588012 CCDC155Q8N6L0 562 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 AKNAD1Q5T1N1 836 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 DNAJC25Q9H1X3 360 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 CEP83Q9Y592 693 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 TACC1O75410 805 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 G2E3Q7L622 706 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 TMEM110-MUSTN1A8MSY1 372 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 ARID5AQ03989 594 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 TAF12Q16514 161 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 ZNF408Q9H9D4 720 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 HSF2BPO75031 334 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 TIMM10P62072 90 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
PTPRS-205ENST00000588012 LETM2Q2VYF4 491 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 IQUBQ8NA54 791 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 PAXBP1Q9Y5B6 917 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 KRT83P78385 493 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 SV2BQ7L1I2 683 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 CCDC65Q8IXS2 484 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 PLIN2Q99541 437 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 PTGS1P23219 599 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 PDE6BP35913 854 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 UBXN1Q04323 297 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 B4E1Z4 1266 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 RLBP1P12271 317 aa18■□□□□ 0.47
PTPRS-205ENST00000588012 RPL13P26373 211 aaKnown RBP17.99■□□□□ 0.47
PTPRS-205ENST00000588012 RNF187Q5TA31 235 aaPredicted RBP17.99■□□□□ 0.47
PTPRS-205ENST00000588012 ZSWIM4Q9H7M6 989 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 APBA3O96018 575 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 A1BGP04217 495 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 BRDTQ58F21 947 aaPredicted RBP17.99■□□□□ 0.47
PTPRS-205ENST00000588012 GSTA5Q7RTV2 222 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 OTUD6BQ8N6M0 293 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 SLAIN2Q9P270 581 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 MROH5Q6ZUA9 1318 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 A0A1W2PRG0 241 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 POLR3GO15318 223 aaPredicted RBP17.99■□□□□ 0.47
PTPRS-205ENST00000588012 LPIN2Q92539 896 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
PTPRS-205ENST00000588012 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
PTPRS-205ENST00000588012 DEXIO95424 95 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 CCDC50Q8IVM0 306 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 ZNF174Q15697 407 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 SYT1P21579 422 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 CCDC129Q6ZRS4 1044 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 CTAGE15A4D2H0 777 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 CTAGE8P0CG41 777 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 CCT6AP40227 531 aaKnown RBP17.98■□□□□ 0.47
PTPRS-205ENST00000588012 CTAGE6Q86UF2 777 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 CTAGE4Q8IX94 777 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 FRMD4BQ9Y2L6 1034 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 SKILP12757 684 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 RPS6KB1P23443 525 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 PLCD1P51178 756 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 APPBP2Q92624 585 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 GLT8D2Q9H1C3 349 aa17.98■□□□□ 0.47
PTPRS-205ENST00000588012 AATFQ9NY61 560 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTPRS-205ENST00000588012 ALDH1B1P30837 517 aa17.97■□□□□ 0.47
PTPRS-205ENST00000588012 DNMT1P26358 1616 aaKnown RBP17.97■□□□□ 0.47
PTPRS-205ENST00000588012 VWA3AA6NCI4 1184 aa17.97■□□□□ 0.47
PTPRS-205ENST00000588012 TAF5LO75529 589 aa17.97■□□□□ 0.47
PTPRS-205ENST00000588012 SPECC1LQ69YQ0 1117 aa17.97■□□□□ 0.47
PTPRS-205ENST00000588012 FCHSD1Q86WN1 690 aa17.97■□□□□ 0.47
PTPRS-205ENST00000588012 DBNDD2Q9BQY9 259 aa17.97■□□□□ 0.47
PTPRS-205ENST00000588012 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms