RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 C7orf69Q9H7B7 122 aa6.95□□□□□ -1.3
PPP4R1-227ENST00000583988 GSC2O15499 205 aa6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 SSTR4P31391 388 aa6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 FMR1Q06787 632 aaKnown RBP eCLIP6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 NFIAQ12857 509 aa6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 ENOX2Q16206 610 aaKnown RBP6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 BEND4Q6ZU67 534 aa6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 SLC51AQ86UW1 340 aa6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 CLEC4MQ9H2X3 399 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-227ENST00000583988 MEGF11A6BM72 1044 aa6.93□□□□□ -1.3
PPP4R1-227ENST00000583988 ZNF423Q2M1K9 1284 aa6.93□□□□□ -1.3
PPP4R1-227ENST00000583988 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
PPP4R1-227ENST00000583988 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
PPP4R1-227ENST00000583988 TMPRSS13Q9BYE2 586 aa6.93□□□□□ -1.3
PPP4R1-227ENST00000583988 CYP4F12Q9HCS2 524 aa6.93□□□□□ -1.3
PPP4R1-227ENST00000583988 GADD45BO75293 160 aaPredicted RBP6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 TGFB1P01137 390 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 DRD2P14416 443 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 RXRBP28702 533 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 FGD1P98174 961 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 SGO2Q562F6 1265 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 EXOSC6Q5RKV6 272 aaKnown RBP6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 CLEC10AQ8IUN9 316 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 FAM83CQ9BQN1 747 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
PPP4R1-227ENST00000583988 MAOBP27338 520 aa6.91□□□□□ -1.3
PPP4R1-227ENST00000583988 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
PPP4R1-227ENST00000583988 NPAS4Q8IUM7 802 aa6.91□□□□□ -1.3
PPP4R1-227ENST00000583988 SMG8Q8ND04 991 aaKnown RBP6.91□□□□□ -1.3
PPP4R1-227ENST00000583988 HIF3AQ9Y2N7 669 aa6.91□□□□□ -1.3
PPP4R1-227ENST00000583988 PNMA6FA0A0J9YX94 578 aa6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 CYP11A1P05108 521 aa6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 P4HBP07237 508 aaKnown RBP6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 MAP4P27816 1152 aaKnown RBP6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 MAPK8P45983 427 aa6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 USP11P51784 963 aa6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 DBNDD2Q9BQY9 259 aa6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 ZNF576Q9H609 170 aa6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 SUGCTQ9HAC7 445 aa6.9□□□□□ -1.3
PPP4R1-227ENST00000583988 EIF4EBP3O60516 100 aaPredicted RBP6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 TIAF1O95411 115 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 POU4F3Q15319 338 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 ALG1LQ6GMV1 187 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 ZDHHC13Q8IUH4 622 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 RGS22Q8NE09 1264 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 DDX54Q8TDD1 881 aaKnown RBP6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 MFSD14AQ96MC6 490 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 CORO1BQ9BR76 489 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 NRSN2Q9GZP1 204 aa6.89□□□□□ -1.31
PPP4R1-227ENST00000583988 ECEL1O95672 775 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 B3GALT4O96024 378 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 CTSBP07858 339 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 CD97P48960 835 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 SOX4Q06945 474 aaPredicted RBP6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 GRM2Q14416 872 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 EAPPQ56P03 285 aaPredicted RBP6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 FBXL6Q8N531 539 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 SHKBP1Q8TBC3 707 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 FBF1Q8TES7 1133 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 FBLIM1Q8WUP2 373 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 ABCB6Q9NP58 842 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 RAD18Q9NS91 495 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 WWC3Q9ULE0 1092 aa6.88□□□□□ -1.31
PPP4R1-227ENST00000583988 TMEM238LA0A1B0GVL6 79 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 WDR64B1ANS9 1081 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 COBLO75128 1261 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 MED26O95402 600 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 LDHBP07195 334 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 ITPKAP23677 461 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 NFKBIBQ15653 356 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 AKAP4Q5JQC9 854 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 CDPF1Q6NVV7 123 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 PI16Q6UXB8 463 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 FBXO33Q7Z6M2 555 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 TRIM56Q9BRZ2 755 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 TRAK1Q9UPV9 953 aa6.87□□□□□ -1.31
PPP4R1-227ENST00000583988 FAM95CA0A1B0GW59 222 aa6.86□□□□□ -1.31
PPP4R1-227ENST00000583988 ADH5P11766 374 aa6.86□□□□□ -1.31
PPP4R1-227ENST00000583988 ATP2B2Q01814 1243 aa6.86□□□□□ -1.31
PPP4R1-227ENST00000583988 PDE3AQ14432 1141 aa6.86□□□□□ -1.31
PPP4R1-227ENST00000583988 PRPF40BQ6NWY9 871 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-227ENST00000583988 SETDB2Q96T68 719 aa6.86□□□□□ -1.31
PPP4R1-227ENST00000583988 ZFYVE1Q9HBF4 777 aa6.86□□□□□ -1.31
PPP4R1-227ENST00000583988 PRR19A6NJB7 356 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 GIPC1O14908 333 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 RAB6AP20340 208 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 GRIK1P39086 918 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 FCGRTP55899 365 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 HP1BP3Q5SSJ5 553 aaPredicted RBP6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 PAOXQ6QHF9 649 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 DTHD1Q6ZMT9 781 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 DYMQ7RTS9 669 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 GLIS3Q8NEA6 775 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms